Protein–RNA interactions for Protein: Q9NQP4

PFDN4, Prefoldin subunit 4, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4Q9NQP4 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PFDN4Q9NQP4 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PFDN4Q9NQP4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.4□□□□□ -0.1
PFDN4Q9NQP4 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.4□□□□□ -0.1
PFDN4Q9NQP4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.4□□□□□ -0.1
PFDN4Q9NQP4 SPDYE22P-201ENST00000582158 798 ntBASIC14.4□□□□□ -0.1
PFDN4Q9NQP4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.4□□□□□ -0.1
PFDN4Q9NQP4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
PFDN4Q9NQP4 AC133539.2-201ENST00000604757 467 ntBASIC14.4□□□□□ -0.1
PFDN4Q9NQP4 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PFDN4Q9NQP4 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PFDN4Q9NQP4 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.4□□□□□ -0.1
PFDN4Q9NQP4 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
PFDN4Q9NQP4 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
PFDN4Q9NQP4 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PFDN4Q9NQP4 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PFDN4Q9NQP4 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PFDN4Q9NQP4 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PFDN4Q9NQP4 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
PFDN4Q9NQP4 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
PFDN4Q9NQP4 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 TERF1P3-201ENST00000505638 1227 ntBASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 RN7SL204P-201ENST00000582831 262 ntBASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 AC015688.4-201ENST00000580780 1647 ntBASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PFDN4Q9NQP4 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 RNU1-114P-201ENST00000365297 166 ntBASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 ACKR1-201ENST00000368121 1240 ntBASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.38□□□□□ -0.11
PFDN4Q9NQP4 TMEM198B-204ENST00000484016 896 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms