Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 ABCD1P4-201ENST00000399687 604 ntBASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 VENTXP4-201ENST00000449029 958 ntBASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 TPT1P11-201ENST00000458482 498 ntBASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 AC068831.5-201ENST00000557387 328 ntBASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 POR-201ENST00000394893 2532 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH11XQ9BZA7 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDH11XQ9BZA7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
PCDH11XQ9BZA7 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH11XQ9BZA7 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDH11XQ9BZA7 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PCDH11XQ9BZA7 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PCDH11XQ9BZA7 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH11XQ9BZA7 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH11XQ9BZA7 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH11XQ9BZA7 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH11XQ9BZA7 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH11XQ9BZA7 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH11XQ9BZA7 SSR4-202ENST00000370085 526 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDH11XQ9BZA7 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH11XQ9BZA7 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC18.4■□□□□ 0.54
PCDH11XQ9BZA7 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC18.4■□□□□ 0.54
PCDH11XQ9BZA7 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDH11XQ9BZA7 GALP-202ENST00000440823 889 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDH11XQ9BZA7 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDH11XQ9BZA7 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC18.4■□□□□ 0.54
PCDH11XQ9BZA7 RBM4-207ENST00000506523 654 ntTSL 3 BASIC18.4■□□□□ 0.54
PCDH11XQ9BZA7 F11R-204ENST00000537746 1245 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDH11XQ9BZA7 AC092862.1-201ENST00000541534 533 ntBASIC18.4■□□□□ 0.54
PCDH11XQ9BZA7 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDH11XQ9BZA7 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC18.4■□□□□ 0.54
PCDH11XQ9BZA7 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC18.4■□□□□ 0.54
PCDH11XQ9BZA7 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH11XQ9BZA7 AC018695.6-201ENST00000614011 534 ntBASIC18.4■□□□□ 0.54
PCDH11XQ9BZA7 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH11XQ9BZA7 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH11XQ9BZA7 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH11XQ9BZA7 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH11XQ9BZA7 CICP14-201ENST00000629111 2732 ntBASIC18.4■□□□□ 0.54
PCDH11XQ9BZA7 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PCDH11XQ9BZA7 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
PCDH11XQ9BZA7 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDH11XQ9BZA7 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PCDH11XQ9BZA7 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PCDH11XQ9BZA7 RN7SL832P-201ENST00000607781 1756 ntBASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 GEMIN8P4-201ENST00000380526 729 ntBASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 AC005777.1-201ENST00000588332 187 ntBASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 AL136982.5-201ENST00000605222 294 ntBASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 WARS-203ENST00000358655 2466 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 HPD-204ENST00000543163 1709 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDH11XQ9BZA7 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH11XQ9BZA7 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms