Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC12.15□□□□□ -0.46
CCL13Q99616 AC005324.6-201ENST00000587972 613 ntBASIC12.15□□□□□ -0.46
CCL13Q99616 NKG7-204ENST00000595217 816 ntTSL 2 BASIC12.15□□□□□ -0.46
CCL13Q99616 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CCL13Q99616 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC12.15□□□□□ -0.46
CCL13Q99616 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.15□□□□□ -0.46
CCL13Q99616 MIR6869-201ENST00000619434 62 ntBASIC12.15□□□□□ -0.46
CCL13Q99616 MIR6799-201ENST00000620297 69 ntBASIC12.15□□□□□ -0.46
CCL13Q99616 AC133540.1-201ENST00000620845 1019 ntBASIC12.15□□□□□ -0.46
CCL13Q99616 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
CCL13Q99616 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
CCL13Q99616 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCL13Q99616 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCL13Q99616 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.15□□□□□ -0.46
CCL13Q99616 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CCL13Q99616 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CCL13Q99616 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCL13Q99616 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCL13Q99616 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCL13Q99616 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCL13Q99616 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.15□□□□□ -0.46
CCL13Q99616 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC12.15□□□□□ -0.46
CCL13Q99616 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
CCL13Q99616 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.15□□□□□ -0.47
CCL13Q99616 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.15□□□□□ -0.47
CCL13Q99616 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
CCL13Q99616 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL13Q99616 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL13Q99616 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
CCL13Q99616 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL13Q99616 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL13Q99616 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.14□□□□□ -0.47
CCL13Q99616 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
CCL13Q99616 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CCL13Q99616 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.14□□□□□ -0.47
CCL13Q99616 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL13Q99616 AC138969.2-201ENST00000532739 9932 ntBASIC12.14□□□□□ -0.47
CCL13Q99616 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.14□□□□□ -0.47
CCL13Q99616 AC027601.5-201ENST00000624065 2482 ntBASIC12.14□□□□□ -0.47
CCL13Q99616 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL13Q99616 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
CCL13Q99616 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC12.14□□□□□ -0.47
CCL13Q99616 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL13Q99616 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL13Q99616 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CCL13Q99616 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
CCL13Q99616 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
CCL13Q99616 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CCL13Q99616 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CCL13Q99616 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL13Q99616 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL13Q99616 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.14□□□□□ -0.47
CCL13Q99616 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC12.14□□□□□ -0.47
CCL13Q99616 AL161932.2-201ENST00000435436 679 ntBASIC12.14□□□□□ -0.47
CCL13Q99616 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
CCL13Q99616 AC106794.1-201ENST00000506935 792 ntBASIC12.14□□□□□ -0.47
CCL13Q99616 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL13Q99616 AC044849.1-201ENST00000519737 1188 ntBASIC12.14□□□□□ -0.47
CCL13Q99616 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.14□□□□□ -0.47
CCL13Q99616 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC12.14□□□□□ -0.47
CCL13Q99616 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
CCL13Q99616 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
CCL13Q99616 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC12.14□□□□□ -0.47
CCL13Q99616 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC12.14□□□□□ -0.47
CCL13Q99616 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
CCL13Q99616 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL13Q99616 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL13Q99616 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL13Q99616 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CCL13Q99616 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
CCL13Q99616 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL13Q99616 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CCL13Q99616 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL13Q99616 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL13Q99616 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL13Q99616 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL13Q99616 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL13Q99616 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CCL13Q99616 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCL13Q99616 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL13Q99616 AL513477.1-201ENST00000602865 2407 ntBASIC12.13□□□□□ -0.47
CCL13Q99616 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL13Q99616 CYP4F23P-201ENST00000593402 1579 ntBASIC12.13□□□□□ -0.47
CCL13Q99616 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
CCL13Q99616 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL13Q99616 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.13□□□□□ -0.47
CCL13Q99616 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL13Q99616 AC152010.1-201ENST00000415779 2006 ntBASIC12.13□□□□□ -0.47
CCL13Q99616 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL13Q99616 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
CCL13Q99616 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CCL13Q99616 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL13Q99616 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL13Q99616 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL13Q99616 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC12.13□□□□□ -0.47
CCL13Q99616 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL13Q99616 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.13□□□□□ -0.47
CCL13Q99616 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC12.13□□□□□ -0.47
CCL13Q99616 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CCL13Q99616 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms