Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PHOX2BQ99453 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PHOX2BQ99453 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
PHOX2BQ99453 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PHOX2BQ99453 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.72□□□□□ -0.05
PHOX2BQ99453 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PHOX2BQ99453 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PHOX2BQ99453 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PHOX2BQ99453 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PHOX2BQ99453 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
PHOX2BQ99453 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PHOX2BQ99453 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PHOX2BQ99453 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.72□□□□□ -0.05
PHOX2BQ99453 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC14.72□□□□□ -0.05
PHOX2BQ99453 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PHOX2BQ99453 FAU-201ENST00000279259 461 ntTSL 2 BASIC14.72□□□□□ -0.05
PHOX2BQ99453 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.72□□□□□ -0.05
PHOX2BQ99453 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
PHOX2BQ99453 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
PHOX2BQ99453 AF274858.1-201ENST00000406288 372 ntBASIC14.72□□□□□ -0.05
PHOX2BQ99453 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PHOX2BQ99453 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.72□□□□□ -0.05
PHOX2BQ99453 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC14.72□□□□□ -0.05
PHOX2BQ99453 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
PHOX2BQ99453 RPL35P9-201ENST00000446059 350 ntBASIC14.72□□□□□ -0.05
PHOX2BQ99453 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PHOX2BQ99453 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.72□□□□□ -0.05
PHOX2BQ99453 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC14.72□□□□□ -0.05
PHOX2BQ99453 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC14.72□□□□□ -0.05
PHOX2BQ99453 CTBP2P6-201ENST00000526402 1229 ntBASIC14.72□□□□□ -0.05
PHOX2BQ99453 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC14.72□□□□□ -0.05
PHOX2BQ99453 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC14.72□□□□□ -0.05
PHOX2BQ99453 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC14.72□□□□□ -0.05
PHOX2BQ99453 GOLGA2P7-209ENST00000560408 745 ntBASIC14.72□□□□□ -0.05
PHOX2BQ99453 AC142086.5-202ENST00000562500 217 ntBASIC14.72□□□□□ -0.05
PHOX2BQ99453 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC14.72□□□□□ -0.05
PHOX2BQ99453 CYP4F36P-201ENST00000589193 186 ntBASIC14.72□□□□□ -0.05
PHOX2BQ99453 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
PHOX2BQ99453 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PHOX2BQ99453 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PHOX2BQ99453 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.72□□□□□ -0.05
PHOX2BQ99453 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PHOX2BQ99453 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PHOX2BQ99453 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.72□□□□□ -0.05
PHOX2BQ99453 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PHOX2BQ99453 AC009090.5-201ENST00000624886 2285 ntBASIC14.72□□□□□ -0.05
PHOX2BQ99453 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PHOX2BQ99453 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PHOX2BQ99453 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PHOX2BQ99453 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PHOX2BQ99453 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PHOX2BQ99453 AC020910.5-201ENST00000623668 1865 ntBASIC14.72□□□□□ -0.05
PHOX2BQ99453 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PHOX2BQ99453 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.72□□□□□ -0.05
PHOX2BQ99453 PPT1-215ENST00000641471 2368 ntBASIC14.71□□□□□ -0.05
PHOX2BQ99453 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PHOX2BQ99453 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
PHOX2BQ99453 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC14.71□□□□□ -0.05
PHOX2BQ99453 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.71□□□□□ -0.05
PHOX2BQ99453 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
PHOX2BQ99453 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PHOX2BQ99453 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
PHOX2BQ99453 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PHOX2BQ99453 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.71□□□□□ -0.05
PHOX2BQ99453 CTBP2P8-201ENST00000422584 1330 ntBASIC14.71□□□□□ -0.05
PHOX2BQ99453 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PHOX2BQ99453 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PHOX2BQ99453 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PHOX2BQ99453 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
PHOX2BQ99453 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
PHOX2BQ99453 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.71□□□□□ -0.05
PHOX2BQ99453 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PHOX2BQ99453 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.71□□□□□ -0.05
PHOX2BQ99453 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PHOX2BQ99453 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.71□□□□□ -0.05
PHOX2BQ99453 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PHOX2BQ99453 RN7SKP109-201ENST00000410592 316 ntBASIC14.71□□□□□ -0.05
PHOX2BQ99453 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC14.71□□□□□ -0.05
PHOX2BQ99453 LINC00571-201ENST00000434565 521 ntTSL 3 BASIC14.71□□□□□ -0.05
PHOX2BQ99453 ZNF736P11Y-201ENST00000442535 1213 ntBASIC14.71□□□□□ -0.05
PHOX2BQ99453 ZNF736P12Y-201ENST00000443152 1243 ntBASIC14.71□□□□□ -0.05
PHOX2BQ99453 ZNF736P4Y-201ENST00000454995 1243 ntBASIC14.71□□□□□ -0.05
PHOX2BQ99453 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC14.71□□□□□ -0.05
PHOX2BQ99453 RN7SL582P-201ENST00000491078 279 ntBASIC14.71□□□□□ -0.05
PHOX2BQ99453 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PHOX2BQ99453 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC14.71□□□□□ -0.05
PHOX2BQ99453 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC14.71□□□□□ -0.05
PHOX2BQ99453 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PHOX2BQ99453 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC14.71□□□□□ -0.05
PHOX2BQ99453 AC009884.2-201ENST00000603110 324 ntBASIC14.71□□□□□ -0.05
PHOX2BQ99453 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC14.71□□□□□ -0.05
PHOX2BQ99453 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.71□□□□□ -0.05
PHOX2BQ99453 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
PHOX2BQ99453 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PHOX2BQ99453 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PHOX2BQ99453 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PHOX2BQ99453 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.71□□□□□ -0.05
PHOX2BQ99453 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PHOX2BQ99453 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC14.71□□□□□ -0.06
PHOX2BQ99453 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms