Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 Z97205.2-201ENST00000564697 1639 ntBASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 TFAMP1-201ENST00000412727 736 ntBASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB3IPQ96QF0 MRPL37P1-201ENST00000592451 1337 ntBASIC14.16□□□□□ -0.14
RAB3IPQ96QF0 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB3IPQ96QF0 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RAB3IPQ96QF0 AC104109.2-201ENST00000602919 1418 ntBASIC14.16□□□□□ -0.14
RAB3IPQ96QF0 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
RAB3IPQ96QF0 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
RAB3IPQ96QF0 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB3IPQ96QF0 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
RAB3IPQ96QF0 LINC01165-201ENST00000445190 1623 ntBASIC14.16□□□□□ -0.14
RAB3IPQ96QF0 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
RAB3IPQ96QF0 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB3IPQ96QF0 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB3IPQ96QF0 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC14.16□□□□□ -0.14
RAB3IPQ96QF0 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB3IPQ96QF0 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RAB3IPQ96QF0 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB3IPQ96QF0 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB3IPQ96QF0 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB3IPQ96QF0 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB3IPQ96QF0 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB3IPQ96QF0 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB3IPQ96QF0 RPL13AP23-201ENST00000480739 586 ntBASIC14.16□□□□□ -0.14
RAB3IPQ96QF0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.16□□□□□ -0.14
RAB3IPQ96QF0 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB3IPQ96QF0 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.16□□□□□ -0.14
RAB3IPQ96QF0 SORD2P-201ENST00000558556 1069 ntBASIC14.16□□□□□ -0.14
RAB3IPQ96QF0 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.16□□□□□ -0.14
RAB3IPQ96QF0 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.16□□□□□ -0.14
RAB3IPQ96QF0 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB3IPQ96QF0 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
RAB3IPQ96QF0 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB3IPQ96QF0 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
RAB3IPQ96QF0 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB3IPQ96QF0 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB3IPQ96QF0 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB3IPQ96QF0 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB3IPQ96QF0 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
RAB3IPQ96QF0 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB3IPQ96QF0 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms