Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CFAP53Q96M91 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CFAP53Q96M91 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CFAP53Q96M91 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CFAP53Q96M91 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CFAP53Q96M91 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC19.28■□□□□ 0.68
CFAP53Q96M91 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CFAP53Q96M91 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CFAP53Q96M91 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CFAP53Q96M91 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CFAP53Q96M91 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CFAP53Q96M91 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CFAP53Q96M91 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CFAP53Q96M91 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CFAP53Q96M91 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CFAP53Q96M91 AC139749.1-202ENST00000617529 3139 ntBASIC19.27■□□□□ 0.68
CFAP53Q96M91 AL022313.4-201ENST00000562756 2046 ntBASIC19.27■□□□□ 0.68
CFAP53Q96M91 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC19.27■□□□□ 0.68
CFAP53Q96M91 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CFAP53Q96M91 AC007191.1-201ENST00000623179 2995 ntBASIC19.27■□□□□ 0.68
CFAP53Q96M91 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CFAP53Q96M91 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CFAP53Q96M91 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC19.27■□□□□ 0.68
CFAP53Q96M91 AC015909.3-201ENST00000572855 1794 ntBASIC19.27■□□□□ 0.68
CFAP53Q96M91 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CFAP53Q96M91 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CFAP53Q96M91 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CFAP53Q96M91 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CFAP53Q96M91 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC19.27■□□□□ 0.68
CFAP53Q96M91 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CFAP53Q96M91 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC19.27■□□□□ 0.68
CFAP53Q96M91 USP17L6P-201ENST00000382470 1197 ntBASIC19.27■□□□□ 0.68
CFAP53Q96M91 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC19.27■□□□□ 0.68
CFAP53Q96M91 PDIA3P2-201ENST00000428073 158 ntBASIC19.27■□□□□ 0.68
CFAP53Q96M91 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CFAP53Q96M91 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC19.27■□□□□ 0.68
CFAP53Q96M91 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC19.27■□□□□ 0.68
CFAP53Q96M91 ARL16-210ENST00000574938 751 ntTSL 2 BASIC19.27■□□□□ 0.68
CFAP53Q96M91 NAT9-211ENST00000580632 799 ntTSL 3 BASIC19.27■□□□□ 0.68
CFAP53Q96M91 RN7SL574P-201ENST00000581512 297 ntBASIC19.27■□□□□ 0.68
CFAP53Q96M91 AC020922.3-201ENST00000595064 547 ntBASIC19.27■□□□□ 0.68
CFAP53Q96M91 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CFAP53Q96M91 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CFAP53Q96M91 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CFAP53Q96M91 USP4-203ENST00000415188 1454 ntTSL 3 BASIC19.27■□□□□ 0.67
CFAP53Q96M91 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CFAP53Q96M91 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CFAP53Q96M91 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CFAP53Q96M91 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CFAP53Q96M91 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC19.27■□□□□ 0.67
CFAP53Q96M91 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CFAP53Q96M91 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CFAP53Q96M91 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC19.27■□□□□ 0.67
CFAP53Q96M91 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
CFAP53Q96M91 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC19.27■□□□□ 0.67
CFAP53Q96M91 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
CFAP53Q96M91 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CFAP53Q96M91 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC19.26■□□□□ 0.67
CFAP53Q96M91 TUBB8P4-201ENST00000511806 1324 ntBASIC19.26■□□□□ 0.67
CFAP53Q96M91 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CFAP53Q96M91 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CFAP53Q96M91 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CFAP53Q96M91 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
CFAP53Q96M91 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CFAP53Q96M91 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CFAP53Q96M91 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
CFAP53Q96M91 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC19.26■□□□□ 0.67
CFAP53Q96M91 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CFAP53Q96M91 MBP-201ENST00000354542 575 ntTSL 2 BASIC19.26■□□□□ 0.67
CFAP53Q96M91 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CFAP53Q96M91 ELK2AP-201ENST00000392510 1007 ntBASIC19.26■□□□□ 0.67
CFAP53Q96M91 DUX4L50-201ENST00000455245 715 ntBASIC19.26■□□□□ 0.67
CFAP53Q96M91 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC19.26■□□□□ 0.67
CFAP53Q96M91 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC19.26■□□□□ 0.67
CFAP53Q96M91 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC19.26■□□□□ 0.67
CFAP53Q96M91 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CFAP53Q96M91 MEG3_2.1-201ENST00000611456 105 ntBASIC19.26■□□□□ 0.67
CFAP53Q96M91 MIR6769A-201ENST00000617340 73 ntBASIC19.26■□□□□ 0.67
CFAP53Q96M91 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CFAP53Q96M91 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC19.26■□□□□ 0.67
CFAP53Q96M91 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC19.26■□□□□ 0.67
CFAP53Q96M91 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CFAP53Q96M91 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CFAP53Q96M91 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CFAP53Q96M91 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CFAP53Q96M91 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CFAP53Q96M91 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CFAP53Q96M91 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC19.26■□□□□ 0.67
CFAP53Q96M91 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CFAP53Q96M91 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CFAP53Q96M91 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CFAP53Q96M91 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC19.25■□□□□ 0.67
CFAP53Q96M91 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CFAP53Q96M91 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CFAP53Q96M91 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CFAP53Q96M91 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CFAP53Q96M91 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
CFAP53Q96M91 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC19.25■□□□□ 0.67
CFAP53Q96M91 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CFAP53Q96M91 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms