Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.34□□□□□ -0.11
SCAMP4Q969E2 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.34□□□□□ -0.11
SCAMP4Q969E2 AC138627.1-207ENST00000641560 1006 ntBASIC14.34□□□□□ -0.11
SCAMP4Q969E2 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCAMP4Q969E2 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SCAMP4Q969E2 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCAMP4Q969E2 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SCAMP4Q969E2 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SCAMP4Q969E2 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCAMP4Q969E2 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCAMP4Q969E2 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SCAMP4Q969E2 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.34□□□□□ -0.11
SCAMP4Q969E2 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCAMP4Q969E2 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCAMP4Q969E2 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCAMP4Q969E2 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SCAMP4Q969E2 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCAMP4Q969E2 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SCAMP4Q969E2 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SCAMP4Q969E2 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.34□□□□□ -0.11
SCAMP4Q969E2 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SCAMP4Q969E2 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCAMP4Q969E2 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.34□□□□□ -0.11
SCAMP4Q969E2 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.34□□□□□ -0.11
SCAMP4Q969E2 AL022313.4-201ENST00000562756 2046 ntBASIC14.34□□□□□ -0.11
SCAMP4Q969E2 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCAMP4Q969E2 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SCAMP4Q969E2 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCAMP4Q969E2 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.34□□□□□ -0.11
SCAMP4Q969E2 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCAMP4Q969E2 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SCAMP4Q969E2 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.33□□□□□ -0.11
SCAMP4Q969E2 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SCAMP4Q969E2 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.33□□□□□ -0.11
SCAMP4Q969E2 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.33□□□□□ -0.11
SCAMP4Q969E2 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SCAMP4Q969E2 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SCAMP4Q969E2 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCAMP4Q969E2 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
SCAMP4Q969E2 AC027601.5-201ENST00000624065 2482 ntBASIC14.33□□□□□ -0.12
SCAMP4Q969E2 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCAMP4Q969E2 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SCAMP4Q969E2 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.33□□□□□ -0.12
SCAMP4Q969E2 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SCAMP4Q969E2 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SCAMP4Q969E2 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
SCAMP4Q969E2 AC015909.3-201ENST00000572855 1794 ntBASIC14.33□□□□□ -0.12
SCAMP4Q969E2 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.33□□□□□ -0.12
SCAMP4Q969E2 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SCAMP4Q969E2 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCAMP4Q969E2 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.33□□□□□ -0.12
SCAMP4Q969E2 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.33□□□□□ -0.12
SCAMP4Q969E2 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.33□□□□□ -0.12
SCAMP4Q969E2 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SCAMP4Q969E2 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.33□□□□□ -0.12
SCAMP4Q969E2 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCAMP4Q969E2 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCAMP4Q969E2 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
SCAMP4Q969E2 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SCAMP4Q969E2 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCAMP4Q969E2 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.33□□□□□ -0.12
SCAMP4Q969E2 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SCAMP4Q969E2 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SCAMP4Q969E2 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCAMP4Q969E2 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SCAMP4Q969E2 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCAMP4Q969E2 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCAMP4Q969E2 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCAMP4Q969E2 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.33□□□□□ -0.12
SCAMP4Q969E2 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCAMP4Q969E2 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.32□□□□□ -0.12
SCAMP4Q969E2 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SCAMP4Q969E2 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SCAMP4Q969E2 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC14.32□□□□□ -0.12
SCAMP4Q969E2 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC14.32□□□□□ -0.12
SCAMP4Q969E2 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
SCAMP4Q969E2 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.32□□□□□ -0.12
SCAMP4Q969E2 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SCAMP4Q969E2 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SCAMP4Q969E2 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SCAMP4Q969E2 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.32□□□□□ -0.12
SCAMP4Q969E2 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
SCAMP4Q969E2 RNA5SP359-201ENST00000364838 113 ntBASIC14.32□□□□□ -0.12
SCAMP4Q969E2 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
SCAMP4Q969E2 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SCAMP4Q969E2 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SCAMP4Q969E2 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SCAMP4Q969E2 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.32□□□□□ -0.12
SCAMP4Q969E2 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.32□□□□□ -0.12
SCAMP4Q969E2 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.32□□□□□ -0.12
SCAMP4Q969E2 AC073150.1-201ENST00000450406 1084 ntBASIC14.32□□□□□ -0.12
SCAMP4Q969E2 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.32□□□□□ -0.12
SCAMP4Q969E2 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.32□□□□□ -0.12
SCAMP4Q969E2 AL161670.2-201ENST00000557650 1227 ntBASIC14.32□□□□□ -0.12
SCAMP4Q969E2 MIR3188-201ENST00000583494 85 ntBASIC14.32□□□□□ -0.12
SCAMP4Q969E2 MEG3_2.1-201ENST00000611456 105 ntBASIC14.32□□□□□ -0.12
SCAMP4Q969E2 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.32□□□□□ -0.12
SCAMP4Q969E2 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.32□□□□□ -0.12
SCAMP4Q969E2 FAM45BP-202ENST00000592932 1624 ntBASIC14.32□□□□□ -0.12
SCAMP4Q969E2 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms