Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 SORD2P-201ENST00000558556 1069 ntBASIC14.85□□□□□ -0.03
PTCD2Q8WV60 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 GPR182-203ENST00000622922 591 ntBASIC14.85□□□□□ -0.03
PTCD2Q8WV60 FP565260.4-201ENST00000624081 513 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 LINC00976-203ENST00000630386 866 ntTSL 5 BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 BEND3P1-201ENST00000421591 1944 ntBASIC14.85□□□□□ -0.03
PTCD2Q8WV60 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PTCD2Q8WV60 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 AL023775.1-201ENST00000454907 1746 ntBASIC14.84□□□□□ -0.03
PTCD2Q8WV60 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 UBE2D3-202ENST00000338145 896 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 BRWD1P1-201ENST00000401091 371 ntBASIC14.84□□□□□ -0.03
PTCD2Q8WV60 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 TRIM60P13-201ENST00000432350 1283 ntBASIC14.84□□□□□ -0.03
PTCD2Q8WV60 HACL1-206ENST00000435217 1269 ntTSL 2 BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 HOMER2P2-201ENST00000451621 847 ntBASIC14.84□□□□□ -0.03
PTCD2Q8WV60 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 ZNF767P-206ENST00000513792 565 ntBASIC14.84□□□□□ -0.03
PTCD2Q8WV60 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 AC004918.3-201ENST00000602609 925 ntBASIC14.84□□□□□ -0.03
PTCD2Q8WV60 MIR6869-201ENST00000619434 62 ntBASIC14.84□□□□□ -0.03
PTCD2Q8WV60 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.84□□□□□ -0.03
PTCD2Q8WV60 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTCD2Q8WV60 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PTCD2Q8WV60 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PTCD2Q8WV60 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PTCD2Q8WV60 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PTCD2Q8WV60 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.83□□□□□ -0.03
PTCD2Q8WV60 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.83□□□□□ -0.03
PTCD2Q8WV60 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
PTCD2Q8WV60 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
PTCD2Q8WV60 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.83□□□□□ -0.03
PTCD2Q8WV60 KRT8P4-201ENST00000509735 1454 ntBASIC14.83□□□□□ -0.03
PTCD2Q8WV60 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
PTCD2Q8WV60 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.83□□□□□ -0.04
PTCD2Q8WV60 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PTCD2Q8WV60 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PTCD2Q8WV60 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
PTCD2Q8WV60 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms