Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
CFAP43Q8NDM7 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CFAP43Q8NDM7 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC21.89■■□□□ 1.1
CFAP43Q8NDM7 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC21.89■■□□□ 1.1
CFAP43Q8NDM7 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CFAP43Q8NDM7 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
CFAP43Q8NDM7 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC21.89■■□□□ 1.1
CFAP43Q8NDM7 STK24P1-201ENST00000455035 1291 ntBASIC21.89■■□□□ 1.1
CFAP43Q8NDM7 SRP14-208ENST00000560773 468 ntTSL 3 BASIC21.89■■□□□ 1.1
CFAP43Q8NDM7 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.1
CFAP43Q8NDM7 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC21.89■■□□□ 1.09
CFAP43Q8NDM7 RER1-203ENST00000378513 3000 ntTSL 3 BASIC21.89■■□□□ 1.09
CFAP43Q8NDM7 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CFAP43Q8NDM7 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CFAP43Q8NDM7 USP39-207ENST00000450066 2086 ntTSL 2 BASIC21.89■■□□□ 1.09
CFAP43Q8NDM7 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CFAP43Q8NDM7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CFAP43Q8NDM7 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CFAP43Q8NDM7 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CFAP43Q8NDM7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
CFAP43Q8NDM7 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CFAP43Q8NDM7 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 AC098657.1-201ENST00000416270 1135 ntBASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 LINP1-201ENST00000417112 917 ntTSL 2 BASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 AC006116.2-201ENST00000589958 988 ntBASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 AC026336.4-201ENST00000624565 1050 ntBASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 SIRPB3P-201ENST00000340424 1216 ntBASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 FAM21EP-201ENST00000417804 985 ntBASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 ZNF877P-201ENST00000437614 612 ntBASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 IGKV1OR-2-201ENST00000457995 350 ntBASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 EEF1GP8-201ENST00000506566 1154 ntBASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 RN7SKP155-201ENST00000516031 288 ntBASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 URAHP-205ENST00000610227 398 ntBASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 AC008536.3-201ENST00000623282 1599 ntBASIC21.88■■□□□ 1.09
CFAP43Q8NDM7 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CFAP43Q8NDM7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC21.87■■□□□ 1.09
CFAP43Q8NDM7 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CFAP43Q8NDM7 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CFAP43Q8NDM7 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CFAP43Q8NDM7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CFAP43Q8NDM7 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
CFAP43Q8NDM7 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC21.87■■□□□ 1.09
CFAP43Q8NDM7 AC004801.1-201ENST00000549557 360 ntBASIC21.87■■□□□ 1.09
CFAP43Q8NDM7 AC079414.2-201ENST00000567157 1104 ntBASIC21.87■■□□□ 1.09
CFAP43Q8NDM7 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC21.87■■□□□ 1.09
CFAP43Q8NDM7 MIR4746-201ENST00000579802 71 ntBASIC21.87■■□□□ 1.09
CFAP43Q8NDM7 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC21.87■■□□□ 1.09
CFAP43Q8NDM7 AL049840.2-201ENST00000602722 535 ntBASIC21.87■■□□□ 1.09
CFAP43Q8NDM7 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC21.87■■□□□ 1.09
CFAP43Q8NDM7 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC21.87■■□□□ 1.09
CFAP43Q8NDM7 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CFAP43Q8NDM7 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CFAP43Q8NDM7 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CFAP43Q8NDM7 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CFAP43Q8NDM7 RPL13AP3-202ENST00000494676 1473 ntBASIC21.86■■□□□ 1.09
CFAP43Q8NDM7 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CFAP43Q8NDM7 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CFAP43Q8NDM7 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CFAP43Q8NDM7 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CFAP43Q8NDM7 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CFAP43Q8NDM7 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CFAP43Q8NDM7 DDC-213ENST00000617822 1809 ntTSL 3 BASIC21.86■■□□□ 1.09
CFAP43Q8NDM7 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CFAP43Q8NDM7 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CFAP43Q8NDM7 ABCD1P4-201ENST00000399687 604 ntBASIC21.86■■□□□ 1.09
CFAP43Q8NDM7 GGTLC4P-201ENST00000402176 664 ntBASIC21.86■■□□□ 1.09
CFAP43Q8NDM7 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC21.86■■□□□ 1.09
CFAP43Q8NDM7 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CFAP43Q8NDM7 RN7SL375P-201ENST00000492442 298 ntBASIC21.86■■□□□ 1.09
CFAP43Q8NDM7 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC21.86■■□□□ 1.09
CFAP43Q8NDM7 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC21.86■■□□□ 1.09
CFAP43Q8NDM7 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC21.86■■□□□ 1.09
CFAP43Q8NDM7 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms