Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 Z97180.1-201ENST00000445173 988 ntBASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 AC026740.1-201ENST00000607068 791 ntBASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 AL805961.1-203ENST00000641078 1258 ntBASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 Z98259.2-201ENST00000641583 609 ntBASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 AC009093.10-201ENST00000641956 1442 ntBASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRIM48Q8IWZ4 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 IGHJ2P-201ENST00000454480 60 ntBASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 RN7SL11P-201ENST00000471305 293 ntBASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 AC022217.1-201ENST00000521069 738 ntBASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 AC100757.4-201ENST00000626934 759 ntBASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 NAP1L6-202ENST00000641404 1222 ntBASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM48Q8IWZ4 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM48Q8IWZ4 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.27□□□□□ -0.12
TRIM48Q8IWZ4 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.27□□□□□ -0.12
TRIM48Q8IWZ4 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM48Q8IWZ4 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM48Q8IWZ4 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM48Q8IWZ4 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM48Q8IWZ4 AC139712.1-201ENST00000378256 1875 ntBASIC14.27□□□□□ -0.12
TRIM48Q8IWZ4 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.27□□□□□ -0.12
TRIM48Q8IWZ4 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM48Q8IWZ4 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.27□□□□□ -0.12
TRIM48Q8IWZ4 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM48Q8IWZ4 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.27□□□□□ -0.12
TRIM48Q8IWZ4 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM48Q8IWZ4 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.27□□□□□ -0.12
TRIM48Q8IWZ4 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.27□□□□□ -0.12
TRIM48Q8IWZ4 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM48Q8IWZ4 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms