Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PTF1AQ7RTS3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PTF1AQ7RTS3 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC18.06■□□□□ 0.48
PTF1AQ7RTS3 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTF1AQ7RTS3 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTF1AQ7RTS3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.06■□□□□ 0.48
PTF1AQ7RTS3 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTF1AQ7RTS3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
PTF1AQ7RTS3 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTF1AQ7RTS3 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTF1AQ7RTS3 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PTF1AQ7RTS3 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTF1AQ7RTS3 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
PTF1AQ7RTS3 MED15P3-201ENST00000413613 326 ntBASIC18.06■□□□□ 0.48
PTF1AQ7RTS3 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC18.06■□□□□ 0.48
PTF1AQ7RTS3 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC18.06■□□□□ 0.48
PTF1AQ7RTS3 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC18.06■□□□□ 0.48
PTF1AQ7RTS3 AC090820.1-201ENST00000519722 591 ntBASIC18.06■□□□□ 0.48
PTF1AQ7RTS3 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC18.06■□□□□ 0.48
PTF1AQ7RTS3 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC18.06■□□□□ 0.48
PTF1AQ7RTS3 AL450487.2-201ENST00000615934 407 ntBASIC18.06■□□□□ 0.48
PTF1AQ7RTS3 AC138627.1-201ENST00000641127 1257 ntBASIC18.06■□□□□ 0.48
PTF1AQ7RTS3 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTF1AQ7RTS3 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
PTF1AQ7RTS3 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC18.06■□□□□ 0.48
PTF1AQ7RTS3 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTF1AQ7RTS3 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PTF1AQ7RTS3 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.06■□□□□ 0.48
PTF1AQ7RTS3 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTF1AQ7RTS3 AC092115.1-201ENST00000566277 1402 ntBASIC18.06■□□□□ 0.48
PTF1AQ7RTS3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.06■□□□□ 0.48
PTF1AQ7RTS3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.06■□□□□ 0.48
PTF1AQ7RTS3 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTF1AQ7RTS3 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 ACTBP14-201ENST00000411655 1089 ntBASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 AC053503.3-201ENST00000448375 114 ntBASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 RN7SL684P-201ENST00000465665 294 ntBASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 RN7SL440P-201ENST00000577855 343 ntBASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 AC123912.6-201ENST00000612657 315 ntBASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 GUCY2EP-203ENST00000531117 1918 ntBASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTF1AQ7RTS3 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PTF1AQ7RTS3 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTF1AQ7RTS3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PTF1AQ7RTS3 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTF1AQ7RTS3 PPT1-215ENST00000641471 2368 ntBASIC18.04■□□□□ 0.48
PTF1AQ7RTS3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTF1AQ7RTS3 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTF1AQ7RTS3 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC18.04■□□□□ 0.48
PTF1AQ7RTS3 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTF1AQ7RTS3 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC18.04■□□□□ 0.48
PTF1AQ7RTS3 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC18.04■□□□□ 0.48
PTF1AQ7RTS3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTF1AQ7RTS3 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTF1AQ7RTS3 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTF1AQ7RTS3 MIR611-201ENST00000384869 67 ntBASIC18.04■□□□□ 0.48
PTF1AQ7RTS3 U73169.1-201ENST00000395152 367 ntBASIC18.04■□□□□ 0.48
PTF1AQ7RTS3 KRT8P6-201ENST00000399259 1207 ntBASIC18.04■□□□□ 0.48
PTF1AQ7RTS3 FTH1P18-201ENST00000412071 549 ntBASIC18.04■□□□□ 0.48
PTF1AQ7RTS3 PHBP10-201ENST00000416467 784 ntBASIC18.04■□□□□ 0.48
PTF1AQ7RTS3 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC18.04■□□□□ 0.48
PTF1AQ7RTS3 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
PTF1AQ7RTS3 CD81-209ENST00000492627 886 ntTSL 3 BASIC18.04■□□□□ 0.48
PTF1AQ7RTS3 RPSAP70-201ENST00000504462 864 ntBASIC18.04■□□□□ 0.48
PTF1AQ7RTS3 RNA5SP420-201ENST00000516997 137 ntBASIC18.04■□□□□ 0.48
PTF1AQ7RTS3 AL512310.5-201ENST00000551999 515 ntBASIC18.04■□□□□ 0.48
PTF1AQ7RTS3 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PTF1AQ7RTS3 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms