Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 ELK2AP-201ENST00000392510 1007 ntBASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 PTPA-217ENST00000434095 870 ntTSL 2 BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 AC116345.2-201ENST00000512837 523 ntBASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 RTN3P1-201ENST00000536295 711 ntBASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 AC026803.1-201ENST00000569130 274 ntBASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 MEG3_2.1-201ENST00000611456 105 ntBASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 LINC01165-201ENST00000445190 1623 ntBASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 AL122018.1-201ENST00000446607 2310 ntBASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 AC041040.2-201ENST00000622926 2899 ntBASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.41□□□□□ -0.26
H3F3CQ6NXT2 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 FRMPD2B-201ENST00000431305 1347 ntBASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 CEP164P1-201ENST00000455142 418 ntBASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 AC012044.1-201ENST00000603431 297 ntBASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 MIR6769A-201ENST00000617340 73 ntBASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 AC128714.1-201ENST00000637035 887 ntBASIC13.4□□□□□ -0.26
H3F3CQ6NXT2 CICP20-201ENST00000443330 2801 ntBASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms