Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
LPCAT4Q643R3 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 AL645937.2-201ENST00000396808 931 ntBASIC13.66□□□□□ -0.22
LPCAT4Q643R3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 TPM4P1-201ENST00000436100 807 ntBASIC13.66□□□□□ -0.22
LPCAT4Q643R3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 AC026434.2-201ENST00000506094 1078 ntBASIC13.66□□□□□ -0.22
LPCAT4Q643R3 SLC25A1P1-201ENST00000528351 927 ntBASIC13.66□□□□□ -0.22
LPCAT4Q643R3 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 AC140113.2-201ENST00000604370 208 ntBASIC13.66□□□□□ -0.22
LPCAT4Q643R3 AC004840.1-201ENST00000636359 365 ntBASIC13.66□□□□□ -0.22
LPCAT4Q643R3 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 AL035456.1-201ENST00000456064 1369 ntBASIC13.66□□□□□ -0.22
LPCAT4Q643R3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC13.66□□□□□ -0.22
LPCAT4Q643R3 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 AL590627.1-203ENST00000421194 1026 ntBASIC13.65□□□□□ -0.22
LPCAT4Q643R3 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
LPCAT4Q643R3 AC131206.1-201ENST00000538078 1211 ntBASIC13.65□□□□□ -0.22
LPCAT4Q643R3 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms