Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDCA8Q53HL2 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CDCA8Q53HL2 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDCA8Q53HL2 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDCA8Q53HL2 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDCA8Q53HL2 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CDCA8Q53HL2 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDCA8Q53HL2 AC006987.1-201ENST00000413610 527 ntBASIC19.8■□□□□ 0.76
CDCA8Q53HL2 HMGA1P1-201ENST00000415560 1062 ntBASIC19.8■□□□□ 0.76
CDCA8Q53HL2 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDCA8Q53HL2 RPL8P2-201ENST00000430538 502 ntBASIC19.8■□□□□ 0.76
CDCA8Q53HL2 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC19.8■□□□□ 0.76
CDCA8Q53HL2 CHCHD2P2-201ENST00000503744 321 ntBASIC19.8■□□□□ 0.76
CDCA8Q53HL2 GOLGA2P8-201ENST00000505201 779 ntBASIC19.8■□□□□ 0.76
CDCA8Q53HL2 AC019193.1-201ENST00000506678 823 ntBASIC19.8■□□□□ 0.76
CDCA8Q53HL2 IGLV3-15-201ENST00000518356 244 ntBASIC19.8■□□□□ 0.76
CDCA8Q53HL2 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC19.8■□□□□ 0.76
CDCA8Q53HL2 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CDCA8Q53HL2 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC19.8■□□□□ 0.76
CDCA8Q53HL2 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC19.8■□□□□ 0.76
CDCA8Q53HL2 SIGLEC18P-201ENST00000602271 909 ntBASIC19.8■□□□□ 0.76
CDCA8Q53HL2 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC19.8■□□□□ 0.76
CDCA8Q53HL2 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC19.8■□□□□ 0.76
CDCA8Q53HL2 AC051619.9-201ENST00000623237 597 ntBASIC19.8■□□□□ 0.76
CDCA8Q53HL2 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDCA8Q53HL2 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDCA8Q53HL2 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDCA8Q53HL2 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDCA8Q53HL2 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDCA8Q53HL2 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CDCA8Q53HL2 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDCA8Q53HL2 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDCA8Q53HL2 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDCA8Q53HL2 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CDCA8Q53HL2 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDCA8Q53HL2 AC152010.1-201ENST00000415779 2006 ntBASIC19.8■□□□□ 0.76
CDCA8Q53HL2 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC19.8■□□□□ 0.76
CDCA8Q53HL2 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CDCA8Q53HL2 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDCA8Q53HL2 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC19.79■□□□□ 0.76
CDCA8Q53HL2 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CDCA8Q53HL2 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC19.79■□□□□ 0.76
CDCA8Q53HL2 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CDCA8Q53HL2 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDCA8Q53HL2 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
CDCA8Q53HL2 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDCA8Q53HL2 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDCA8Q53HL2 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC19.79■□□□□ 0.76
CDCA8Q53HL2 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDCA8Q53HL2 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC19.79■□□□□ 0.76
CDCA8Q53HL2 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDCA8Q53HL2 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CDCA8Q53HL2 AL627231.1-201ENST00000394467 1125 ntBASIC19.79■□□□□ 0.76
CDCA8Q53HL2 AC073869.2-201ENST00000417338 1026 ntBASIC19.79■□□□□ 0.76
CDCA8Q53HL2 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC19.79■□□□□ 0.76
CDCA8Q53HL2 AC007326.1-201ENST00000604539 458 ntBASIC19.79■□□□□ 0.76
CDCA8Q53HL2 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC19.79■□□□□ 0.76
CDCA8Q53HL2 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDCA8Q53HL2 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDCA8Q53HL2 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CDCA8Q53HL2 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDCA8Q53HL2 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDCA8Q53HL2 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDCA8Q53HL2 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDCA8Q53HL2 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDCA8Q53HL2 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDCA8Q53HL2 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDCA8Q53HL2 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDCA8Q53HL2 CAP2P1-201ENST00000557743 1390 ntBASIC19.79■□□□□ 0.76
CDCA8Q53HL2 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDCA8Q53HL2 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDCA8Q53HL2 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDCA8Q53HL2 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDCA8Q53HL2 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDCA8Q53HL2 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDCA8Q53HL2 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC19.79■□□□□ 0.76
CDCA8Q53HL2 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CDCA8Q53HL2 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDCA8Q53HL2 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CDCA8Q53HL2 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDCA8Q53HL2 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDCA8Q53HL2 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CDCA8Q53HL2 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDCA8Q53HL2 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDCA8Q53HL2 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDCA8Q53HL2 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CDCA8Q53HL2 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC19.78■□□□□ 0.76
CDCA8Q53HL2 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDCA8Q53HL2 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDCA8Q53HL2 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDCA8Q53HL2 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC19.78■□□□□ 0.76
CDCA8Q53HL2 BX679664.3-201ENST00000414070 555 ntBASIC19.78■□□□□ 0.76
CDCA8Q53HL2 AL807761.2-201ENST00000422849 729 ntBASIC19.78■□□□□ 0.76
CDCA8Q53HL2 EEF1DP6-201ENST00000449232 372 ntBASIC19.78■□□□□ 0.76
CDCA8Q53HL2 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC19.78■□□□□ 0.76
CDCA8Q53HL2 AC113935.1-201ENST00000471722 555 ntBASIC19.78■□□□□ 0.76
CDCA8Q53HL2 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC19.78■□□□□ 0.76
CDCA8Q53HL2 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC19.78■□□□□ 0.76
CDCA8Q53HL2 CD164-210ENST00000512821 964 ntTSL 2 BASIC19.78■□□□□ 0.76
CDCA8Q53HL2 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms