Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ANKRD55Q3KP44 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ANKRD55Q3KP44 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.08□□□□□ -0.48
ANKRD55Q3KP44 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ANKRD55Q3KP44 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.08□□□□□ -0.48
ANKRD55Q3KP44 TREML5P-201ENST00000421694 576 ntBASIC12.08□□□□□ -0.48
ANKRD55Q3KP44 AC136604.1-202ENST00000425471 771 ntBASIC12.08□□□□□ -0.48
ANKRD55Q3KP44 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC12.08□□□□□ -0.48
ANKRD55Q3KP44 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.08□□□□□ -0.48
ANKRD55Q3KP44 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ANKRD55Q3KP44 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC12.08□□□□□ -0.48
ANKRD55Q3KP44 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.08□□□□□ -0.48
ANKRD55Q3KP44 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
ANKRD55Q3KP44 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ANKRD55Q3KP44 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
ANKRD55Q3KP44 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ANKRD55Q3KP44 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ANKRD55Q3KP44 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ANKRD55Q3KP44 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
ANKRD55Q3KP44 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ANKRD55Q3KP44 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
ANKRD55Q3KP44 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.08□□□□□ -0.48
ANKRD55Q3KP44 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
ANKRD55Q3KP44 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ANKRD55Q3KP44 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
ANKRD55Q3KP44 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.08□□□□□ -0.48
ANKRD55Q3KP44 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ANKRD55Q3KP44 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ANKRD55Q3KP44 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.08□□□□□ -0.48
ANKRD55Q3KP44 AL022313.4-201ENST00000562756 2046 ntBASIC12.08□□□□□ -0.48
ANKRD55Q3KP44 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.08□□□□□ -0.48
ANKRD55Q3KP44 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ANKRD55Q3KP44 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC12.08□□□□□ -0.48
ANKRD55Q3KP44 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 PCDHA5-203ENST00000614258 4248 ntBASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 AL031719.1-201ENST00000623365 2587 ntBASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 GCOM2-201ENST00000509133 1104 ntBASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 AC097493.3-201ENST00000509725 367 ntBASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 AQP6-203ENST00000551733 849 ntTSL 3 BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ANKRD55Q3KP44 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms