Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC17.7■□□□□ 0.42
ATP2B3Q16720 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC17.7■□□□□ 0.42
ATP2B3Q16720 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2B3Q16720 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2B3Q16720 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2B3Q16720 AC026320.2-201ENST00000434379 478 ntBASIC17.7■□□□□ 0.42
ATP2B3Q16720 RN7SL277P-201ENST00000481521 288 ntBASIC17.7■□□□□ 0.42
ATP2B3Q16720 RN7SL530P-201ENST00000485097 298 ntBASIC17.7■□□□□ 0.42
ATP2B3Q16720 AC008723.1-201ENST00000506922 207 ntBASIC17.7■□□□□ 0.42
ATP2B3Q16720 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC17.7■□□□□ 0.42
ATP2B3Q16720 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
ATP2B3Q16720 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC17.7■□□□□ 0.42
ATP2B3Q16720 AC007718.1-201ENST00000621078 280 ntBASIC17.7■□□□□ 0.42
ATP2B3Q16720 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC17.7■□□□□ 0.42
ATP2B3Q16720 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2B3Q16720 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2B3Q16720 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2B3Q16720 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2B3Q16720 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2B3Q16720 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC17.7■□□□□ 0.42
ATP2B3Q16720 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2B3Q16720 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
ATP2B3Q16720 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
ATP2B3Q16720 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2B3Q16720 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC17.7■□□□□ 0.42
ATP2B3Q16720 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC17.7■□□□□ 0.42
ATP2B3Q16720 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC17.7■□□□□ 0.42
ATP2B3Q16720 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2B3Q16720 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2B3Q16720 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC17.7■□□□□ 0.42
ATP2B3Q16720 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2B3Q16720 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B3Q16720 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B3Q16720 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.69■□□□□ 0.42
ATP2B3Q16720 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B3Q16720 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B3Q16720 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B3Q16720 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B3Q16720 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC17.69■□□□□ 0.42
ATP2B3Q16720 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B3Q16720 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B3Q16720 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B3Q16720 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B3Q16720 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC17.69■□□□□ 0.42
ATP2B3Q16720 RN7SL832P-201ENST00000607781 1756 ntBASIC17.69■□□□□ 0.42
ATP2B3Q16720 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ATP2B3Q16720 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ATP2B3Q16720 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B3Q16720 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B3Q16720 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
ATP2B3Q16720 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B3Q16720 EEF1DP6-201ENST00000449232 372 ntBASIC17.69■□□□□ 0.42
ATP2B3Q16720 DUX4L50-201ENST00000455245 715 ntBASIC17.69■□□□□ 0.42
ATP2B3Q16720 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC17.69■□□□□ 0.42
ATP2B3Q16720 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC17.69■□□□□ 0.42
ATP2B3Q16720 RN7SL67P-201ENST00000492147 296 ntBASIC17.69■□□□□ 0.42
ATP2B3Q16720 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC17.69■□□□□ 0.42
ATP2B3Q16720 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B3Q16720 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B3Q16720 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.69■□□□□ 0.42
ATP2B3Q16720 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B3Q16720 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC17.69■□□□□ 0.42
ATP2B3Q16720 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
ATP2B3Q16720 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
ATP2B3Q16720 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
ATP2B3Q16720 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B3Q16720 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ATP2B3Q16720 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ATP2B3Q16720 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B3Q16720 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B3Q16720 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B3Q16720 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B3Q16720 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B3Q16720 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B3Q16720 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2B3Q16720 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.69■□□□□ 0.42
ATP2B3Q16720 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2B3Q16720 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP2B3Q16720 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2B3Q16720 FAM90A2P-201ENST00000511144 1395 ntBASIC17.68■□□□□ 0.42
ATP2B3Q16720 FAM90A25P-201ENST00000528404 1395 ntBASIC17.68■□□□□ 0.42
ATP2B3Q16720 CAP2P1-201ENST00000557743 1390 ntBASIC17.68■□□□□ 0.42
ATP2B3Q16720 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP2B3Q16720 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2B3Q16720 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
ATP2B3Q16720 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2B3Q16720 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2B3Q16720 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP2B3Q16720 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
ATP2B3Q16720 BANF1P3-201ENST00000412556 261 ntBASIC17.68■□□□□ 0.42
ATP2B3Q16720 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP2B3Q16720 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP2B3Q16720 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC17.68■□□□□ 0.42
ATP2B3Q16720 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2B3Q16720 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2B3Q16720 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC17.68■□□□□ 0.42
ATP2B3Q16720 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2B3Q16720 AC140658.4-201ENST00000561990 352 ntBASIC17.68■□□□□ 0.42
ATP2B3Q16720 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2B3Q16720 AC093752.3-201ENST00000567343 901 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms