Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRNB3Q05901 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CHRNB3Q05901 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CHRNB3Q05901 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CHRNB3Q05901 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CHRNB3Q05901 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CHRNB3Q05901 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CHRNB3Q05901 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRNB3Q05901 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRNB3Q05901 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRNB3Q05901 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRNB3Q05901 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.79□□□□□ -0.2
CHRNB3Q05901 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRNB3Q05901 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRNB3Q05901 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRNB3Q05901 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.79□□□□□ -0.2
CHRNB3Q05901 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHRNB3Q05901 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CHRNB3Q05901 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CHRNB3Q05901 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.79□□□□□ -0.2
CHRNB3Q05901 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRNB3Q05901 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CHRNB3Q05901 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRNB3Q05901 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.79□□□□□ -0.2
CHRNB3Q05901 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHRNB3Q05901 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.79□□□□□ -0.2
CHRNB3Q05901 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.79□□□□□ -0.2
CHRNB3Q05901 AC087499.6-201ENST00000411576 835 ntBASIC13.79□□□□□ -0.2
CHRNB3Q05901 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.79□□□□□ -0.2
CHRNB3Q05901 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.79□□□□□ -0.2
CHRNB3Q05901 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRNB3Q05901 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.79□□□□□ -0.2
CHRNB3Q05901 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.79□□□□□ -0.2
CHRNB3Q05901 AL049840.4-201ENST00000602422 811 ntBASIC13.79□□□□□ -0.2
CHRNB3Q05901 AL662799.1-202ENST00000614205 422 ntBASIC13.79□□□□□ -0.2
CHRNB3Q05901 AL035252.4-201ENST00000624174 288 ntBASIC13.79□□□□□ -0.2
CHRNB3Q05901 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.79□□□□□ -0.2
CHRNB3Q05901 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRNB3Q05901 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
CHRNB3Q05901 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRNB3Q05901 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CHRNB3Q05901 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.79□□□□□ -0.2
CHRNB3Q05901 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CHRNB3Q05901 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CHRNB3Q05901 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRNB3Q05901 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.79□□□□□ -0.2
CHRNB3Q05901 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.79□□□□□ -0.2
CHRNB3Q05901 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHRNB3Q05901 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.79□□□□□ -0.2
CHRNB3Q05901 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRNB3Q05901 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CHRNB3Q05901 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRNB3Q05901 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRNB3Q05901 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRNB3Q05901 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CHRNB3Q05901 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.78□□□□□ -0.2
CHRNB3Q05901 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRNB3Q05901 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHRNB3Q05901 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRNB3Q05901 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRNB3Q05901 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.78□□□□□ -0.2
CHRNB3Q05901 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.78□□□□□ -0.2
CHRNB3Q05901 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.78□□□□□ -0.2
CHRNB3Q05901 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHRNB3Q05901 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.78□□□□□ -0.2
CHRNB3Q05901 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRNB3Q05901 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.78□□□□□ -0.2
CHRNB3Q05901 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.78□□□□□ -0.2
CHRNB3Q05901 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CHRNB3Q05901 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHRNB3Q05901 AC114501.2-201ENST00000439631 535 ntBASIC13.78□□□□□ -0.2
CHRNB3Q05901 SPTLC1P1-201ENST00000447199 261 ntBASIC13.78□□□□□ -0.2
CHRNB3Q05901 FAM86LP-201ENST00000478302 853 ntBASIC13.78□□□□□ -0.2
CHRNB3Q05901 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHRNB3Q05901 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.78□□□□□ -0.2
CHRNB3Q05901 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.78□□□□□ -0.2
CHRNB3Q05901 AC131206.1-201ENST00000538078 1211 ntBASIC13.78□□□□□ -0.2
CHRNB3Q05901 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.78□□□□□ -0.2
CHRNB3Q05901 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.78□□□□□ -0.2
CHRNB3Q05901 AC009407.1-201ENST00000568958 598 ntBASIC13.78□□□□□ -0.2
CHRNB3Q05901 AC036164.1-201ENST00000570544 333 ntBASIC13.78□□□□□ -0.2
CHRNB3Q05901 AL391069.4-201ENST00000609583 481 ntBASIC13.78□□□□□ -0.2
CHRNB3Q05901 AC008738.7-201ENST00000609744 511 ntBASIC13.78□□□□□ -0.2
CHRNB3Q05901 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.78□□□□□ -0.2
CHRNB3Q05901 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRNB3Q05901 AL391825.1-201ENST00000457671 1364 ntBASIC13.78□□□□□ -0.2
CHRNB3Q05901 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CHRNB3Q05901 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRNB3Q05901 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRNB3Q05901 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRNB3Q05901 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRNB3Q05901 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.78□□□□□ -0.2
CHRNB3Q05901 AC007541.1-201ENST00000570282 1469 ntBASIC13.78□□□□□ -0.2
CHRNB3Q05901 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRNB3Q05901 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRNB3Q05901 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRNB3Q05901 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRNB3Q05901 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHRNB3Q05901 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRNB3Q05901 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms