Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.3□□□□□ -0.12
CDKL1Q00532 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.3□□□□□ -0.12
CDKL1Q00532 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDKL1Q00532 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.3□□□□□ -0.12
CDKL1Q00532 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.3□□□□□ -0.12
CDKL1Q00532 AL162274.1-201ENST00000617191 1098 ntBASIC14.3□□□□□ -0.12
CDKL1Q00532 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKL1Q00532 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CDKL1Q00532 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.3□□□□□ -0.12
CDKL1Q00532 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDKL1Q00532 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKL1Q00532 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
CDKL1Q00532 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CDKL1Q00532 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKL1Q00532 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
CDKL1Q00532 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.3□□□□□ -0.12
CDKL1Q00532 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKL1Q00532 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKL1Q00532 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.3□□□□□ -0.12
CDKL1Q00532 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.3□□□□□ -0.12
CDKL1Q00532 PDIA3P1-201ENST00000471856 1510 ntBASIC14.3□□□□□ -0.12
CDKL1Q00532 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDKL1Q00532 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.3□□□□□ -0.12
CDKL1Q00532 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDKL1Q00532 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.3□□□□□ -0.12
CDKL1Q00532 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CDKL1Q00532 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDKL1Q00532 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CDKL1Q00532 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.29□□□□□ -0.12
CDKL1Q00532 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKL1Q00532 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKL1Q00532 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDKL1Q00532 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CDKL1Q00532 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDKL1Q00532 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.29□□□□□ -0.12
CDKL1Q00532 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CDKL1Q00532 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.29□□□□□ -0.12
CDKL1Q00532 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKL1Q00532 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKL1Q00532 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CDKL1Q00532 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.29□□□□□ -0.12
CDKL1Q00532 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.29□□□□□ -0.12
CDKL1Q00532 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.29□□□□□ -0.12
CDKL1Q00532 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.29□□□□□ -0.12
CDKL1Q00532 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.29□□□□□ -0.12
CDKL1Q00532 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CDKL1Q00532 AC112492.5-201ENST00000421897 457 ntBASIC14.29□□□□□ -0.12
CDKL1Q00532 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDKL1Q00532 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.29□□□□□ -0.12
CDKL1Q00532 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.29□□□□□ -0.12
CDKL1Q00532 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.29□□□□□ -0.12
CDKL1Q00532 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CDKL1Q00532 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CDKL1Q00532 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.29□□□□□ -0.12
CDKL1Q00532 PPY2P-201ENST00000582808 702 ntBASIC14.29□□□□□ -0.12
CDKL1Q00532 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDKL1Q00532 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.29□□□□□ -0.12
CDKL1Q00532 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.29□□□□□ -0.12
CDKL1Q00532 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.29□□□□□ -0.12
CDKL1Q00532 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKL1Q00532 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.29□□□□□ -0.12
CDKL1Q00532 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDKL1Q00532 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.29□□□□□ -0.12
CDKL1Q00532 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.29□□□□□ -0.12
CDKL1Q00532 AC064801.2-201ENST00000625052 1303 ntBASIC14.29□□□□□ -0.12
CDKL1Q00532 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKL1Q00532 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKL1Q00532 AC118758.2-201ENST00000614242 2813 ntBASIC14.29□□□□□ -0.12
CDKL1Q00532 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKL1Q00532 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKL1Q00532 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CDKL1Q00532 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.29□□□□□ -0.12
CDKL1Q00532 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.29□□□□□ -0.12
CDKL1Q00532 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKL1Q00532 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKL1Q00532 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKL1Q00532 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKL1Q00532 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
CDKL1Q00532 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKL1Q00532 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKL1Q00532 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKL1Q00532 SHC1P1-201ENST00000425230 1745 ntBASIC14.29□□□□□ -0.12
CDKL1Q00532 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.29□□□□□ -0.12
CDKL1Q00532 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKL1Q00532 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKL1Q00532 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKL1Q00532 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKL1Q00532 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKL1Q00532 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.29□□□□□ -0.12
CDKL1Q00532 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CDKL1Q00532 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDKL1Q00532 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKL1Q00532 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKL1Q00532 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDKL1Q00532 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CDKL1Q00532 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDKL1Q00532 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDKL1Q00532 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDKL1Q00532 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CDKL1Q00532 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms