Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H3AP68431 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H3AP68431 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H3AP68431 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
HIST1H3AP68431 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H3AP68431 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H3AP68431 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H3AP68431 AC144522.1-201ENST00000625111 1658 ntBASIC12.65□□□□□ -0.38
HIST1H3AP68431 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H3AP68431 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
HIST1H3AP68431 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H3AP68431 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H3AP68431 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
HIST1H3AP68431 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC12.65□□□□□ -0.38
HIST1H3AP68431 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
HIST1H3AP68431 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC12.65□□□□□ -0.38
HIST1H3AP68431 GPR53P-205ENST00000457298 1084 ntBASIC12.65□□□□□ -0.38
HIST1H3AP68431 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.65□□□□□ -0.38
HIST1H3AP68431 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC12.65□□□□□ -0.38
HIST1H3AP68431 ACR-203ENST00000529621 708 ntTSL 5 BASIC12.65□□□□□ -0.38
HIST1H3AP68431 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H3AP68431 AL160314.3-201ENST00000556041 767 ntBASIC12.65□□□□□ -0.38
HIST1H3AP68431 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.65□□□□□ -0.38
HIST1H3AP68431 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
HIST1H3AP68431 MIR4741-201ENST00000579822 90 ntBASIC12.65□□□□□ -0.38
HIST1H3AP68431 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.65□□□□□ -0.38
HIST1H3AP68431 AC021016.3-201ENST00000608367 477 ntBASIC12.65□□□□□ -0.38
HIST1H3AP68431 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.65□□□□□ -0.38
HIST1H3AP68431 BAP1-211ENST00000615113 489 ntBASIC12.65□□□□□ -0.38
HIST1H3AP68431 AC090386.2-201ENST00000623010 1039 ntBASIC12.65□□□□□ -0.38
HIST1H3AP68431 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.65□□□□□ -0.38
HIST1H3AP68431 COX11-210ENST00000639671 696 ntBASIC12.65□□□□□ -0.38
HIST1H3AP68431 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
HIST1H3AP68431 AC015818.8-201ENST00000587907 1519 ntBASIC12.65□□□□□ -0.38
HIST1H3AP68431 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.65□□□□□ -0.38
HIST1H3AP68431 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H3AP68431 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H3AP68431 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H3AP68431 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H3AP68431 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H3AP68431 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H3AP68431 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H3AP68431 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H3AP68431 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.65□□□□□ -0.38
HIST1H3AP68431 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H3AP68431 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H3AP68431 AC005840.4-201ENST00000541242 2494 ntBASIC12.65□□□□□ -0.38
HIST1H3AP68431 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H3AP68431 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H3AP68431 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H3AP68431 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.65□□□□□ -0.38
HIST1H3AP68431 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H3AP68431 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
HIST1H3AP68431 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H3AP68431 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H3AP68431 MBLAC2-202ENST00000514906 1936 ntBASIC12.64□□□□□ -0.39
HIST1H3AP68431 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H3AP68431 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H3AP68431 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.64□□□□□ -0.39
HIST1H3AP68431 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H3AP68431 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H3AP68431 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
HIST1H3AP68431 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.64□□□□□ -0.39
HIST1H3AP68431 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H3AP68431 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H3AP68431 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H3AP68431 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
HIST1H3AP68431 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H3AP68431 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H3AP68431 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.64□□□□□ -0.39
HIST1H3AP68431 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
HIST1H3AP68431 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H3AP68431 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
HIST1H3AP68431 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H3AP68431 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC12.64□□□□□ -0.39
HIST1H3AP68431 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC12.64□□□□□ -0.39
HIST1H3AP68431 OLR1-203ENST00000432556 950 ntTSL 2 BASIC12.64□□□□□ -0.39
HIST1H3AP68431 HSPB1P2-201ENST00000448722 546 ntBASIC12.64□□□□□ -0.39
HIST1H3AP68431 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H3AP68431 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H3AP68431 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
HIST1H3AP68431 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H3AP68431 RNA5SP412-201ENST00000516234 123 ntBASIC12.64□□□□□ -0.39
HIST1H3AP68431 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.64□□□□□ -0.39
HIST1H3AP68431 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC12.64□□□□□ -0.39
HIST1H3AP68431 AC022217.1-201ENST00000521069 738 ntBASIC12.64□□□□□ -0.39
HIST1H3AP68431 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H3AP68431 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC12.64□□□□□ -0.39
HIST1H3AP68431 AGER-214ENST00000538695 487 ntTSL 2 BASIC12.64□□□□□ -0.39
HIST1H3AP68431 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC12.64□□□□□ -0.39
HIST1H3AP68431 HILS1-202ENST00000545329 423 ntBASIC12.64□□□□□ -0.39
HIST1H3AP68431 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.64□□□□□ -0.39
HIST1H3AP68431 AC124068.2-201ENST00000569473 1109 ntBASIC12.64□□□□□ -0.39
HIST1H3AP68431 AC005324.6-201ENST00000587972 613 ntBASIC12.64□□□□□ -0.39
HIST1H3AP68431 KLK11-210ENST00000600362 759 ntTSL 3 BASIC12.64□□□□□ -0.39
HIST1H3AP68431 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H3AP68431 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H3AP68431 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HIST1H3AP68431 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.64□□□□□ -0.39
HIST1H3AP68431 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms