Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
CKS1BP61024 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CKS1BP61024 IMPDH1P4-201ENST00000445028 1534 ntBASIC10.27□□□□□ -0.77
CKS1BP61024 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CKS1BP61024 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CKS1BP61024 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CKS1BP61024 MYO7A-201ENST00000409619 7106 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CKS1BP61024 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
CKS1BP61024 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC10.27□□□□□ -0.77
CKS1BP61024 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CKS1BP61024 CLTC-215ENST00000621829 8587 ntAPPRIS ALT1 TSL 2 BASIC10.27□□□□□ -0.77
CKS1BP61024 AL035456.1-201ENST00000456064 1369 ntBASIC10.26□□□□□ -0.77
CKS1BP61024 GRIN2A-206ENST00000562109 4338 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
CKS1BP61024 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
CKS1BP61024 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
CKS1BP61024 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
CKS1BP61024 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC10.26□□□□□ -0.77
CKS1BP61024 MTHFR-210ENST00000641407 2387 ntBASIC10.26□□□□□ -0.77
CKS1BP61024 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 PRKAB2-201ENST00000254101 5417 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 NAV2-204ENST00000396087 7882 ntTSL 5 BASIC10.26□□□□□ -0.77
CKS1BP61024 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC10.26□□□□□ -0.77
CKS1BP61024 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
CKS1BP61024 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 SLC8B1-213ENST00000552014 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
CKS1BP61024 TK1-203ENST00000588734 1681 ntTSL 2 BASIC10.26□□□□□ -0.77
CKS1BP61024 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 ABCA8-208ENST00000586539 5088 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC10.26□□□□□ -0.77
CKS1BP61024 DUSP4-202ENST00000240101 2959 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC10.26□□□□□ -0.77
CKS1BP61024 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 AL133267.1-201ENST00000398220 340 ntBASIC10.26□□□□□ -0.77
CKS1BP61024 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC10.26□□□□□ -0.77
CKS1BP61024 RPP21-221ENST00000428040 594 ntTSL 2 BASIC10.26□□□□□ -0.77
CKS1BP61024 ADH5P3-201ENST00000433842 1137 ntBASIC10.26□□□□□ -0.77
CKS1BP61024 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC10.26□□□□□ -0.77
CKS1BP61024 SERBP1P3-201ENST00000459980 809 ntBASIC10.26□□□□□ -0.77
CKS1BP61024 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC10.26□□□□□ -0.77
CKS1BP61024 PFN2-205ENST00000461868 613 ntTSL 2 BASIC10.26□□□□□ -0.77
CKS1BP61024 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC10.26□□□□□ -0.77
CKS1BP61024 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC10.26□□□□□ -0.77
CKS1BP61024 ALG1L8P-201ENST00000533887 760 ntBASIC10.26□□□□□ -0.77
CKS1BP61024 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC10.26□□□□□ -0.77
CKS1BP61024 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC10.26□□□□□ -0.77
CKS1BP61024 LITAF-210ENST00000571976 548 ntTSL 2 BASIC10.26□□□□□ -0.77
CKS1BP61024 LITAF-214ENST00000574703 486 ntTSL 2 BASIC10.26□□□□□ -0.77
CKS1BP61024 KLK8-205ENST00000593490 267 ntTSL 3 BASIC10.26□□□□□ -0.77
CKS1BP61024 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
CKS1BP61024 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 AC120114.3-201ENST00000611923 658 ntBASIC10.26□□□□□ -0.77
CKS1BP61024 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC10.26□□□□□ -0.77
CKS1BP61024 C20orf181-201ENST00000623918 480 ntBASIC10.26□□□□□ -0.77
CKS1BP61024 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC10.26□□□□□ -0.77
CKS1BP61024 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
CKS1BP61024 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
CKS1BP61024 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC10.26□□□□□ -0.77
CKS1BP61024 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC10.26□□□□□ -0.77
CKS1BP61024 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 LAMB1-203ENST00000393560 2806 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 AC110048.1-201ENST00000604293 2157 ntBASIC10.26□□□□□ -0.77
CKS1BP61024 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC10.26□□□□□ -0.77
CKS1BP61024 AC015818.8-201ENST00000587907 1519 ntBASIC10.26□□□□□ -0.77
CKS1BP61024 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 KLHL38-201ENST00000325995 1982 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 TFDP2-215ENST00000489671 9857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 APOL3-205ENST00000397293 2214 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC10.26□□□□□ -0.77
CKS1BP61024 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 AC007787.1-201ENST00000588095 1583 ntBASIC10.26□□□□□ -0.77
CKS1BP61024 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
CKS1BP61024 DIP2C-205ENST00000634311 4961 ntTSL 5 BASIC10.26□□□□□ -0.77
CKS1BP61024 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
CKS1BP61024 PLA2G15-201ENST00000219345 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms