Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDH13P55290 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDH13P55290 AC098614.1-201ENST00000368528 745 ntBASIC14.2□□□□□ -0.14
CDH13P55290 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH13P55290 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.2□□□□□ -0.14
CDH13P55290 AC007389.4-201ENST00000454674 793 ntBASIC14.2□□□□□ -0.14
CDH13P55290 CICP12-201ENST00000455801 843 ntBASIC14.2□□□□□ -0.14
CDH13P55290 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDH13P55290 FTH1P14-201ENST00000482930 551 ntBASIC14.2□□□□□ -0.14
CDH13P55290 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDH13P55290 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
CDH13P55290 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH13P55290 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.2□□□□□ -0.14
CDH13P55290 AC005586.2-201ENST00000563946 837 ntBASIC14.2□□□□□ -0.14
CDH13P55290 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH13P55290 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH13P55290 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.2□□□□□ -0.14
CDH13P55290 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.2□□□□□ -0.14
CDH13P55290 AC244669.2-201ENST00000612320 853 ntBASIC14.2□□□□□ -0.14
CDH13P55290 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH13P55290 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH13P55290 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH13P55290 AC009093.10-201ENST00000641956 1442 ntBASIC14.2□□□□□ -0.14
CDH13P55290 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH13P55290 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CDH13P55290 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH13P55290 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH13P55290 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDH13P55290 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH13P55290 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
CDH13P55290 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDH13P55290 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.2□□□□□ -0.14
CDH13P55290 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CDH13P55290 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH13P55290 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CDH13P55290 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CDH13P55290 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CDH13P55290 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH13P55290 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDH13P55290 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH13P55290 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
CDH13P55290 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH13P55290 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
CDH13P55290 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH13P55290 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CDH13P55290 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CDH13P55290 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH13P55290 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH13P55290 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH13P55290 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDH13P55290 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.19□□□□□ -0.14
CDH13P55290 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.19□□□□□ -0.14
CDH13P55290 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.19□□□□□ -0.14
CDH13P55290 AC015909.5-201ENST00000624336 2266 ntBASIC14.19□□□□□ -0.14
CDH13P55290 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH13P55290 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDH13P55290 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.19□□□□□ -0.14
CDH13P55290 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH13P55290 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CDH13P55290 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDH13P55290 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.19□□□□□ -0.14
CDH13P55290 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CDH13P55290 USP32P1-208ENST00000506594 1164 ntBASIC14.19□□□□□ -0.14
CDH13P55290 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDH13P55290 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.19□□□□□ -0.14
CDH13P55290 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.19□□□□□ -0.14
CDH13P55290 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CDH13P55290 AC078819.1-201ENST00000547454 765 ntBASIC14.19□□□□□ -0.14
CDH13P55290 AC012085.1-201ENST00000548270 765 ntBASIC14.19□□□□□ -0.14
CDH13P55290 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.19□□□□□ -0.14
CDH13P55290 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CDH13P55290 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDH13P55290 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.19□□□□□ -0.14
CDH13P55290 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.19□□□□□ -0.14
CDH13P55290 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CDH13P55290 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH13P55290 AC015818.8-201ENST00000587907 1519 ntBASIC14.19□□□□□ -0.14
CDH13P55290 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
CDH13P55290 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH13P55290 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH13P55290 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH13P55290 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.19□□□□□ -0.14
CDH13P55290 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH13P55290 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.19□□□□□ -0.14
CDH13P55290 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH13P55290 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH13P55290 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.19□□□□□ -0.14
CDH13P55290 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.19□□□□□ -0.14
CDH13P55290 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH13P55290 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH13P55290 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CDH13P55290 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CDH13P55290 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.19□□□□□ -0.14
CDH13P55290 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CDH13P55290 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH13P55290 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.18□□□□□ -0.14
CDH13P55290 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CDH13P55290 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDH13P55290 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDH13P55290 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms