Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH8P55286 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH8P55286 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH8P55286 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.41■□□□□ 0.06
CDH8P55286 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.41■□□□□ 0.06
CDH8P55286 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.41■□□□□ 0.06
CDH8P55286 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH8P55286 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CDH8P55286 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH8P55286 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH8P55286 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH8P55286 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH8P55286 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH8P55286 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH8P55286 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CDH8P55286 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CDH8P55286 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH8P55286 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH8P55286 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH8P55286 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CDH8P55286 MST1P2-201ENST00000457982 2291 ntBASIC15.4■□□□□ 0.06
CDH8P55286 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CDH8P55286 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH8P55286 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CDH8P55286 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH8P55286 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH8P55286 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CDH8P55286 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH8P55286 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.4■□□□□ 0.06
CDH8P55286 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH8P55286 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC15.4■□□□□ 0.06
CDH8P55286 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.4■□□□□ 0.06
CDH8P55286 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH8P55286 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC15.4■□□□□ 0.06
CDH8P55286 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
CDH8P55286 AL591471.1-201ENST00000621855 229 ntBASIC15.4■□□□□ 0.06
CDH8P55286 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CDH8P55286 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH8P55286 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH8P55286 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CDH8P55286 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CDH8P55286 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH8P55286 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH8P55286 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH8P55286 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH8P55286 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CDH8P55286 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH8P55286 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH8P55286 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH8P55286 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CDH8P55286 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH8P55286 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH8P55286 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
CDH8P55286 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH8P55286 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC15.39■□□□□ 0.05
CDH8P55286 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.39■□□□□ 0.05
CDH8P55286 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH8P55286 LINC01165-201ENST00000445190 1623 ntBASIC15.39■□□□□ 0.05
CDH8P55286 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
CDH8P55286 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH8P55286 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH8P55286 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH8P55286 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC15.39■□□□□ 0.05
CDH8P55286 CCT8L1P-201ENST00000465400 1674 ntBASIC15.39■□□□□ 0.05
CDH8P55286 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CDH8P55286 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH8P55286 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CDH8P55286 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CDH8P55286 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH8P55286 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH8P55286 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CDH8P55286 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.39■□□□□ 0.05
CDH8P55286 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH8P55286 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC15.39■□□□□ 0.05
CDH8P55286 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH8P55286 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH8P55286 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH8P55286 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC15.39■□□□□ 0.05
CDH8P55286 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH8P55286 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
CDH8P55286 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.39■□□□□ 0.05
CDH8P55286 AL139099.5-201ENST00000635274 300 ntBASIC15.39■□□□□ 0.05
CDH8P55286 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH8P55286 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH8P55286 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CDH8P55286 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH8P55286 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH8P55286 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH8P55286 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH8P55286 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH8P55286 AC097376.2-205ENST00000610159 5334 ntBASIC15.39■□□□□ 0.05
CDH8P55286 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH8P55286 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH8P55286 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CDH8P55286 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH8P55286 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDH8P55286 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.38■□□□□ 0.05
CDH8P55286 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDH8P55286 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC15.38■□□□□ 0.05
CDH8P55286 AC008132.1-202ENST00000342005 1389 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms