Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRPF1P55201 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC18.36■□□□□ 0.53
BRPF1P55201 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRPF1P55201 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRPF1P55201 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BRPF1P55201 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRPF1P55201 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC18.36■□□□□ 0.53
BRPF1P55201 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC18.36■□□□□ 0.53
BRPF1P55201 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRPF1P55201 EEF1DP6-201ENST00000449232 372 ntBASIC18.36■□□□□ 0.53
BRPF1P55201 AC005740.2-201ENST00000511085 419 ntBASIC18.36■□□□□ 0.53
BRPF1P55201 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
BRPF1P55201 IQSEC3P1-201ENST00000538799 536 ntBASIC18.36■□□□□ 0.53
BRPF1P55201 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BRPF1P55201 NIFKP4-201ENST00000567275 1192 ntBASIC18.36■□□□□ 0.53
BRPF1P55201 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BRPF1P55201 SYT17-208ENST00000568433 812 ntTSL 3 BASIC18.36■□□□□ 0.53
BRPF1P55201 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC18.36■□□□□ 0.53
BRPF1P55201 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC18.36■□□□□ 0.53
BRPF1P55201 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC18.36■□□□□ 0.53
BRPF1P55201 AL645939.5-201ENST00000606834 243 ntBASIC18.36■□□□□ 0.53
BRPF1P55201 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC18.36■□□□□ 0.53
BRPF1P55201 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC18.36■□□□□ 0.53
BRPF1P55201 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRPF1P55201 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC18.36■□□□□ 0.53
BRPF1P55201 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
BRPF1P55201 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
BRPF1P55201 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
BRPF1P55201 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRPF1P55201 AC041040.2-201ENST00000622926 2899 ntBASIC18.36■□□□□ 0.53
BRPF1P55201 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
BRPF1P55201 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BRPF1P55201 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
BRPF1P55201 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BRPF1P55201 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRPF1P55201 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRPF1P55201 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
BRPF1P55201 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRPF1P55201 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC18.35■□□□□ 0.53
BRPF1P55201 UCKL1-AS1-201ENST00000623569 3602 ntBASIC18.35■□□□□ 0.53
BRPF1P55201 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
BRPF1P55201 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC18.35■□□□□ 0.53
BRPF1P55201 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC18.35■□□□□ 0.53
BRPF1P55201 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC18.35■□□□□ 0.53
BRPF1P55201 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRPF1P55201 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
BRPF1P55201 LINC01815-202ENST00000641468 1409 ntBASIC18.35■□□□□ 0.53
BRPF1P55201 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRPF1P55201 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
BRPF1P55201 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC18.35■□□□□ 0.53
BRPF1P55201 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BRPF1P55201 AC006480.2-201ENST00000609770 1337 ntBASIC18.35■□□□□ 0.53
BRPF1P55201 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC18.35■□□□□ 0.53
BRPF1P55201 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
BRPF1P55201 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BRPF1P55201 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC18.35■□□□□ 0.53
BRPF1P55201 SPTLC1P5-201ENST00000450718 252 ntBASIC18.35■□□□□ 0.53
BRPF1P55201 AC125604.1-201ENST00000496255 707 ntBASIC18.35■□□□□ 0.53
BRPF1P55201 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BRPF1P55201 MIR3188-201ENST00000583494 85 ntBASIC18.35■□□□□ 0.53
BRPF1P55201 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BRPF1P55201 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BRPF1P55201 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
BRPF1P55201 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRPF1P55201 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
BRPF1P55201 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
BRPF1P55201 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
BRPF1P55201 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRPF1P55201 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRPF1P55201 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRPF1P55201 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC18.35■□□□□ 0.53
BRPF1P55201 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BRPF1P55201 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRPF1P55201 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
BRPF1P55201 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRPF1P55201 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRPF1P55201 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
BRPF1P55201 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
BRPF1P55201 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC18.34■□□□□ 0.53
BRPF1P55201 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
BRPF1P55201 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC18.34■□□□□ 0.53
BRPF1P55201 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC18.34■□□□□ 0.53
BRPF1P55201 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC18.34■□□□□ 0.53
BRPF1P55201 RN7SL555P-201ENST00000584742 339 ntBASIC18.34■□□□□ 0.53
BRPF1P55201 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BRPF1P55201 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRPF1P55201 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRPF1P55201 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC18.34■□□□□ 0.53
BRPF1P55201 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRPF1P55201 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRPF1P55201 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BRPF1P55201 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRPF1P55201 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC18.33■□□□□ 0.53
BRPF1P55201 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
BRPF1P55201 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BRPF1P55201 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC18.33■□□□□ 0.53
BRPF1P55201 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BRPF1P55201 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC18.33■□□□□ 0.53
BRPF1P55201 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
BRPF1P55201 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms