Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLK1P49759 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.74□□□□□ -0.21
CLK1P49759 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.74□□□□□ -0.21
CLK1P49759 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CLK1P49759 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLK1P49759 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.74□□□□□ -0.21
CLK1P49759 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.74□□□□□ -0.21
CLK1P49759 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLK1P49759 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CLK1P49759 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CLK1P49759 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLK1P49759 AC019294.4-201ENST00000561777 2905 ntBASIC13.74□□□□□ -0.21
CLK1P49759 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLK1P49759 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLK1P49759 AL139385.1-201ENST00000611744 3272 ntBASIC13.74□□□□□ -0.21
CLK1P49759 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CLK1P49759 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLK1P49759 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLK1P49759 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
CLK1P49759 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CLK1P49759 LILRP1-201ENST00000444199 1370 ntBASIC13.73□□□□□ -0.21
CLK1P49759 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLK1P49759 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CLK1P49759 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.73□□□□□ -0.21
CLK1P49759 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CLK1P49759 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CLK1P49759 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLK1P49759 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CLK1P49759 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLK1P49759 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
CLK1P49759 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLK1P49759 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.73□□□□□ -0.21
CLK1P49759 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLK1P49759 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.73□□□□□ -0.21
CLK1P49759 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.73□□□□□ -0.21
CLK1P49759 RN7SL752P-201ENST00000463779 287 ntBASIC13.73□□□□□ -0.21
CLK1P49759 AC022137.2-201ENST00000503482 481 ntBASIC13.73□□□□□ -0.21
CLK1P49759 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.73□□□□□ -0.21
CLK1P49759 WASH4P-201ENST00000564273 1246 ntBASIC13.73□□□□□ -0.21
CLK1P49759 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.73□□□□□ -0.21
CLK1P49759 CLUHP6-201ENST00000580789 941 ntBASIC13.73□□□□□ -0.21
CLK1P49759 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.73□□□□□ -0.21
CLK1P49759 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLK1P49759 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLK1P49759 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CLK1P49759 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLK1P49759 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLK1P49759 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLK1P49759 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CLK1P49759 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLK1P49759 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CLK1P49759 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.73□□□□□ -0.21
CLK1P49759 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.73□□□□□ -0.21
CLK1P49759 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLK1P49759 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.73□□□□□ -0.21
CLK1P49759 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLK1P49759 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
CLK1P49759 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLK1P49759 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC13.73□□□□□ -0.21
CLK1P49759 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CLK1P49759 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.73□□□□□ -0.21
CLK1P49759 CU639417.3-201ENST00000624240 1404 ntBASIC13.73□□□□□ -0.21
CLK1P49759 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLK1P49759 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLK1P49759 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLK1P49759 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLK1P49759 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.72□□□□□ -0.21
CLK1P49759 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLK1P49759 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLK1P49759 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLK1P49759 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CLK1P49759 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLK1P49759 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.72□□□□□ -0.21
CLK1P49759 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CLK1P49759 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLK1P49759 KRT8P24-201ENST00000560290 1559 ntBASIC13.72□□□□□ -0.21
CLK1P49759 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CLK1P49759 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
CLK1P49759 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLK1P49759 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
CLK1P49759 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.72□□□□□ -0.21
CLK1P49759 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLK1P49759 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CLK1P49759 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.72□□□□□ -0.21
CLK1P49759 ACTBP8-201ENST00000403258 1108 ntBASIC13.72□□□□□ -0.21
CLK1P49759 KLF2P2-201ENST00000416807 1039 ntBASIC13.72□□□□□ -0.21
CLK1P49759 HLA-K-203ENST00000430151 1046 ntBASIC13.72□□□□□ -0.21
CLK1P49759 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.72□□□□□ -0.21
CLK1P49759 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.72□□□□□ -0.21
CLK1P49759 GIMAP3P-201ENST00000495150 836 ntBASIC13.72□□□□□ -0.21
CLK1P49759 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.72□□□□□ -0.21
CLK1P49759 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.72□□□□□ -0.21
CLK1P49759 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.72□□□□□ -0.21
CLK1P49759 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.72□□□□□ -0.21
CLK1P49759 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.72□□□□□ -0.21
CLK1P49759 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.72□□□□□ -0.21
CLK1P49759 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.72□□□□□ -0.21
CLK1P49759 AC015818.8-201ENST00000587907 1519 ntBASIC13.72□□□□□ -0.21
CLK1P49759 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLK1P49759 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms