Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.1■□□□□ 0.01
MMP13P45452 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.1■□□□□ 0.01
MMP13P45452 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.1■□□□□ 0.01
MMP13P45452 AP006547.1-201ENST00000563435 692 ntBASIC15.1■□□□□ 0.01
MMP13P45452 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.1■□□□□ 0.01
MMP13P45452 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MMP13P45452 COX11-210ENST00000639671 696 ntBASIC15.1■□□□□ 0.01
MMP13P45452 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.1■□□□□ 0.01
MMP13P45452 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC15.1■□□□□ 0.01
MMP13P45452 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC15.1■□□□□ 0.01
MMP13P45452 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MMP13P45452 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.1■□□□□ 0.01
MMP13P45452 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MMP13P45452 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC15.1■□□□□ 0.01
MMP13P45452 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MMP13P45452 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
MMP13P45452 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MMP13P45452 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
MMP13P45452 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MMP13P45452 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MMP13P45452 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC15.1■□□□□ 0.01
MMP13P45452 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.1■□□□□ 0.01
MMP13P45452 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.1■□□□□ 0.01
MMP13P45452 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
MMP13P45452 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MMP13P45452 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MMP13P45452 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MMP13P45452 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
MMP13P45452 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
MMP13P45452 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MMP13P45452 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MMP13P45452 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
MMP13P45452 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC15.09■□□□□ 0.01
MMP13P45452 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC15.09■□□□□ 0.01
MMP13P45452 Z82170.1-201ENST00000625081 3192 ntBASIC15.09■□□□□ 0.01
MMP13P45452 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
MMP13P45452 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
MMP13P45452 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MMP13P45452 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.09■□□□□ 0.01
MMP13P45452 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.09■□□□□ 0.01
MMP13P45452 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.09■□□□□ 0.01
MMP13P45452 ATP5G2P4-201ENST00000442175 420 ntBASIC15.09■□□□□ 0.01
MMP13P45452 AL355994.2-201ENST00000447882 704 ntBASIC15.09■□□□□ 0.01
MMP13P45452 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MMP13P45452 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC15.09■□□□□ 0.01
MMP13P45452 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.09■□□□□ 0.01
MMP13P45452 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.09■□□□□ 0.01
MMP13P45452 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.09■□□□□ 0.01
MMP13P45452 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.09■□□□□ 0.01
MMP13P45452 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.09■□□□□ 0.01
MMP13P45452 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MMP13P45452 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
MMP13P45452 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
MMP13P45452 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MMP13P45452 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.09■□□□□ 0.01
MMP13P45452 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MMP13P45452 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.09■□□□□ 0.01
MMP13P45452 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
MMP13P45452 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MMP13P45452 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
MMP13P45452 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.09■□□□□ 0.01
MMP13P45452 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MMP13P45452 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MMP13P45452 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MMP13P45452 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MMP13P45452 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
MMP13P45452 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
MMP13P45452 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
MMP13P45452 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
MMP13P45452 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.08■□□□□ 0.01
MMP13P45452 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
MMP13P45452 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
MMP13P45452 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP13P45452 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP13P45452 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
MMP13P45452 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP13P45452 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
MMP13P45452 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP13P45452 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP13P45452 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP13P45452 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP13P45452 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP13P45452 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
MMP13P45452 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.08■□□□□ 0
MMP13P45452 GK-202ENST00000378941 458 ntTSL 3 BASIC15.08■□□□□ 0
MMP13P45452 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
MMP13P45452 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.08■□□□□ 0
MMP13P45452 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.08■□□□□ 0
MMP13P45452 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.08■□□□□ 0
MMP13P45452 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.08■□□□□ 0
MMP13P45452 PUDPP3-201ENST00000445368 636 ntBASIC15.08■□□□□ 0
MMP13P45452 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.08■□□□□ 0
MMP13P45452 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.08■□□□□ 0
MMP13P45452 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.08■□□□□ 0
MMP13P45452 MIR4259-201ENST00000584466 101 ntBASIC15.08■□□□□ 0
MMP13P45452 AL358472.3-201ENST00000608147 415 ntBASIC15.08■□□□□ 0
MMP13P45452 MIR6074-201ENST00000612054 107 ntBASIC15.08■□□□□ 0
MMP13P45452 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
MMP13P45452 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
MMP13P45452 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms