Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC18.04■□□□□ 0.48
COL15A1P39059 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL15A1P39059 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL15A1P39059 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC18.04■□□□□ 0.48
COL15A1P39059 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC18.04■□□□□ 0.48
COL15A1P39059 FAU-202ENST00000434372 533 ntTSL 2 BASIC18.04■□□□□ 0.48
COL15A1P39059 DDX39AP1-201ENST00000445147 1181 ntBASIC18.04■□□□□ 0.48
COL15A1P39059 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL15A1P39059 CHCHD2P2-201ENST00000503744 321 ntBASIC18.04■□□□□ 0.48
COL15A1P39059 AC012158.2-201ENST00000536546 354 ntBASIC18.04■□□□□ 0.48
COL15A1P39059 VENTXP3-201ENST00000546480 773 ntBASIC18.04■□□□□ 0.48
COL15A1P39059 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC18.04■□□□□ 0.48
COL15A1P39059 MT2A-202ENST00000561491 581 ntTSL 2 BASIC18.04■□□□□ 0.48
COL15A1P39059 CMC2-204ENST00000562713 573 ntTSL 3 BASIC18.04■□□□□ 0.48
COL15A1P39059 CMC2-209ENST00000565108 399 ntTSL 2 BASIC18.04■□□□□ 0.48
COL15A1P39059 AC010632.2-201ENST00000588369 1224 ntBASIC18.04■□□□□ 0.48
COL15A1P39059 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
COL15A1P39059 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
COL15A1P39059 MIR6746-201ENST00000620971 63 ntBASIC18.04■□□□□ 0.48
COL15A1P39059 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL15A1P39059 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
COL15A1P39059 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL15A1P39059 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL15A1P39059 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL15A1P39059 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL15A1P39059 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
COL15A1P39059 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL15A1P39059 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC18.03■□□□□ 0.48
COL15A1P39059 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL15A1P39059 GSN-209ENST00000449733 2702 ntTSL 2 BASIC18.03■□□□□ 0.48
COL15A1P39059 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
COL15A1P39059 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC18.03■□□□□ 0.48
COL15A1P39059 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL15A1P39059 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL15A1P39059 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
COL15A1P39059 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL15A1P39059 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC18.03■□□□□ 0.48
COL15A1P39059 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL15A1P39059 AC244197.1-201ENST00000456494 951 ntBASIC18.03■□□□□ 0.48
COL15A1P39059 AC006529.1-201ENST00000459978 637 ntBASIC18.03■□□□□ 0.48
COL15A1P39059 NT5C-204ENST00000578337 582 ntTSL 2 BASIC18.03■□□□□ 0.48
COL15A1P39059 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
COL15A1P39059 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL15A1P39059 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COL15A1P39059 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL15A1P39059 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC18.02■□□□□ 0.48
COL15A1P39059 FUCA1P1-201ENST00000374476 1351 ntBASIC18.02■□□□□ 0.48
COL15A1P39059 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL15A1P39059 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL15A1P39059 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL15A1P39059 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC18.02■□□□□ 0.48
COL15A1P39059 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC18.02■□□□□ 0.48
COL15A1P39059 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL15A1P39059 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
COL15A1P39059 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL15A1P39059 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC18.02■□□□□ 0.48
COL15A1P39059 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
COL15A1P39059 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
COL15A1P39059 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
COL15A1P39059 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC18.02■□□□□ 0.47
COL15A1P39059 OR52M2P-201ENST00000414298 959 ntBASIC18.02■□□□□ 0.47
COL15A1P39059 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC18.02■□□□□ 0.47
COL15A1P39059 COX5A-205ENST00000568517 582 ntTSL 3 BASIC18.02■□□□□ 0.47
COL15A1P39059 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC18.02■□□□□ 0.47
COL15A1P39059 AC008972.2-201ENST00000606587 494 ntBASIC18.02■□□□□ 0.47
COL15A1P39059 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
COL15A1P39059 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC18.01■□□□□ 0.47
COL15A1P39059 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC18.01■□□□□ 0.47
COL15A1P39059 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC18.01■□□□□ 0.47
COL15A1P39059 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL15A1P39059 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL15A1P39059 AC011498.7-201ENST00000624986 2027 ntBASIC18.01■□□□□ 0.47
COL15A1P39059 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL15A1P39059 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL15A1P39059 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC18.01■□□□□ 0.47
COL15A1P39059 AC232323.1-201ENST00000540724 2099 ntBASIC18.01■□□□□ 0.47
COL15A1P39059 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL15A1P39059 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
COL15A1P39059 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL15A1P39059 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC18.01■□□□□ 0.47
COL15A1P39059 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC18.01■□□□□ 0.47
COL15A1P39059 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC18.01■□□□□ 0.47
COL15A1P39059 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL15A1P39059 SURF4-203ENST00000371991 715 ntTSL 3 BASIC18.01■□□□□ 0.47
COL15A1P39059 SERF2-206ENST00000409291 807 ntTSL 3 BASIC18.01■□□□□ 0.47
COL15A1P39059 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
COL15A1P39059 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL15A1P39059 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC18.01■□□□□ 0.47
COL15A1P39059 RN7SL582P-201ENST00000491078 279 ntBASIC18.01■□□□□ 0.47
COL15A1P39059 RPS23-207ENST00000511844 530 ntTSL 2 BASIC18.01■□□□□ 0.47
COL15A1P39059 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC18.01■□□□□ 0.47
COL15A1P39059 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC18.01■□□□□ 0.47
COL15A1P39059 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
COL15A1P39059 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC18.01■□□□□ 0.47
COL15A1P39059 AL132994.1-201ENST00000554098 400 ntBASIC18.01■□□□□ 0.47
COL15A1P39059 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC18.01■□□□□ 0.47
COL15A1P39059 AL359091.4-201ENST00000610052 409 ntBASIC18.01■□□□□ 0.47
COL15A1P39059 HPX-213ENST00000615166 826 ntTSL 5 BASIC18.01■□□□□ 0.47
COL15A1P39059 AC091769.1-201ENST00000619576 568 ntBASIC18.01■□□□□ 0.47
COL15A1P39059 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms