Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
COL8A2P25067 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC12.24□□□□□ -0.45
COL8A2P25067 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
COL8A2P25067 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
COL8A2P25067 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
COL8A2P25067 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
COL8A2P25067 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
COL8A2P25067 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
COL8A2P25067 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
COL8A2P25067 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
COL8A2P25067 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
COL8A2P25067 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
COL8A2P25067 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
COL8A2P25067 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.24□□□□□ -0.45
COL8A2P25067 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.24□□□□□ -0.45
COL8A2P25067 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
COL8A2P25067 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC12.24□□□□□ -0.45
COL8A2P25067 AHCYP4-201ENST00000419201 1315 ntBASIC12.24□□□□□ -0.45
COL8A2P25067 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC12.24□□□□□ -0.45
COL8A2P25067 ST13P19-201ENST00000442505 1124 ntBASIC12.24□□□□□ -0.45
COL8A2P25067 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC12.24□□□□□ -0.45
COL8A2P25067 AL353637.1-201ENST00000451571 732 ntBASIC12.24□□□□□ -0.45
COL8A2P25067 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC12.24□□□□□ -0.45
COL8A2P25067 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.24□□□□□ -0.45
COL8A2P25067 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
COL8A2P25067 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.24□□□□□ -0.45
COL8A2P25067 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
COL8A2P25067 PGAM1P5-201ENST00000548011 764 ntBASIC12.24□□□□□ -0.45
COL8A2P25067 FOS-206ENST00000555347 1280 ntTSL 2 BASIC12.24□□□□□ -0.45
COL8A2P25067 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC12.24□□□□□ -0.45
COL8A2P25067 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC12.24□□□□□ -0.45
COL8A2P25067 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC12.24□□□□□ -0.45
COL8A2P25067 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
COL8A2P25067 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC12.24□□□□□ -0.45
COL8A2P25067 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
COL8A2P25067 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
COL8A2P25067 HCG18-245ENST00000602550 559 ntTSL 4 BASIC12.24□□□□□ -0.45
COL8A2P25067 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
COL8A2P25067 AC012044.1-201ENST00000603431 297 ntBASIC12.24□□□□□ -0.45
COL8A2P25067 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
COL8A2P25067 AL353770.1-201ENST00000614915 403 ntBASIC12.24□□□□□ -0.45
COL8A2P25067 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.24□□□□□ -0.45
COL8A2P25067 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
COL8A2P25067 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
COL8A2P25067 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
COL8A2P25067 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
COL8A2P25067 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
COL8A2P25067 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
COL8A2P25067 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
COL8A2P25067 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.24□□□□□ -0.45
COL8A2P25067 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
COL8A2P25067 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.24□□□□□ -0.45
COL8A2P25067 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
COL8A2P25067 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
COL8A2P25067 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
COL8A2P25067 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
COL8A2P25067 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
COL8A2P25067 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.23□□□□□ -0.45
COL8A2P25067 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
COL8A2P25067 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
COL8A2P25067 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
COL8A2P25067 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.23□□□□□ -0.45
COL8A2P25067 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.23□□□□□ -0.45
COL8A2P25067 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
COL8A2P25067 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
COL8A2P25067 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
COL8A2P25067 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
COL8A2P25067 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.23□□□□□ -0.45
COL8A2P25067 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.23□□□□□ -0.45
COL8A2P25067 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
COL8A2P25067 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
COL8A2P25067 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
COL8A2P25067 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.23□□□□□ -0.45
COL8A2P25067 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
COL8A2P25067 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.23□□□□□ -0.45
COL8A2P25067 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
COL8A2P25067 AC091046.1-201ENST00000331871 207 ntBASIC12.23□□□□□ -0.45
COL8A2P25067 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC12.23□□□□□ -0.45
COL8A2P25067 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
COL8A2P25067 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
COL8A2P25067 NCR3-202ENST00000376071 541 ntTSL 5 BASIC12.23□□□□□ -0.45
COL8A2P25067 AC007274.2-201ENST00000421675 662 ntBASIC12.23□□□□□ -0.45
COL8A2P25067 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
COL8A2P25067 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
COL8A2P25067 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.23□□□□□ -0.45
COL8A2P25067 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC12.23□□□□□ -0.45
COL8A2P25067 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC12.23□□□□□ -0.45
COL8A2P25067 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
COL8A2P25067 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.23□□□□□ -0.45
COL8A2P25067 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC12.23□□□□□ -0.45
COL8A2P25067 AC124068.2-201ENST00000569473 1109 ntBASIC12.23□□□□□ -0.45
COL8A2P25067 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC12.23□□□□□ -0.45
COL8A2P25067 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC12.23□□□□□ -0.45
COL8A2P25067 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC12.23□□□□□ -0.45
COL8A2P25067 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.23□□□□□ -0.45
COL8A2P25067 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
COL8A2P25067 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
COL8A2P25067 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
COL8A2P25067 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
COL8A2P25067 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms