Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC14.16□□□□□ -0.14
BCKDHBP21953 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BCKDHBP21953 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC14.16□□□□□ -0.14
BCKDHBP21953 AC006987.1-201ENST00000413610 527 ntBASIC14.16□□□□□ -0.14
BCKDHBP21953 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC14.16□□□□□ -0.14
BCKDHBP21953 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
BCKDHBP21953 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC14.16□□□□□ -0.14
BCKDHBP21953 KRT18P46-201ENST00000435568 1279 ntBASIC14.16□□□□□ -0.14
BCKDHBP21953 AC005740.1-201ENST00000515639 522 ntBASIC14.16□□□□□ -0.14
BCKDHBP21953 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC14.16□□□□□ -0.14
BCKDHBP21953 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC14.16□□□□□ -0.14
BCKDHBP21953 USB1-205ENST00000561743 1135 ntTSL 3 BASIC14.16□□□□□ -0.14
BCKDHBP21953 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC14.16□□□□□ -0.14
BCKDHBP21953 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC14.16□□□□□ -0.14
BCKDHBP21953 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
BCKDHBP21953 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC14.16□□□□□ -0.14
BCKDHBP21953 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC14.16□□□□□ -0.14
BCKDHBP21953 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
BCKDHBP21953 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BCKDHBP21953 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BCKDHBP21953 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
BCKDHBP21953 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.16□□□□□ -0.14
BCKDHBP21953 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.16□□□□□ -0.14
BCKDHBP21953 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.16□□□□□ -0.14
BCKDHBP21953 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.16□□□□□ -0.14
BCKDHBP21953 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BCKDHBP21953 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BCKDHBP21953 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
BCKDHBP21953 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
BCKDHBP21953 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BCKDHBP21953 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
BCKDHBP21953 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
BCKDHBP21953 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
BCKDHBP21953 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
BCKDHBP21953 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BCKDHBP21953 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BCKDHBP21953 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BCKDHBP21953 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BCKDHBP21953 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
BCKDHBP21953 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
BCKDHBP21953 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
BCKDHBP21953 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BCKDHBP21953 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BCKDHBP21953 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BCKDHBP21953 AC144831.1-201ENST00000573312 2656 ntBASIC14.15□□□□□ -0.14
BCKDHBP21953 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.15□□□□□ -0.14
BCKDHBP21953 AC018442.1-201ENST00000421439 2061 ntBASIC14.15□□□□□ -0.14
BCKDHBP21953 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.15□□□□□ -0.14
BCKDHBP21953 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
BCKDHBP21953 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.15□□□□□ -0.14
BCKDHBP21953 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
BCKDHBP21953 MSANTD2P1-201ENST00000445341 1368 ntBASIC14.15□□□□□ -0.14
BCKDHBP21953 SURF4-203ENST00000371991 715 ntTSL 3 BASIC14.15□□□□□ -0.14
BCKDHBP21953 MIR566-201ENST00000385187 94 ntBASIC14.15□□□□□ -0.14
BCKDHBP21953 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
BCKDHBP21953 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
BCKDHBP21953 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC14.15□□□□□ -0.14
BCKDHBP21953 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC14.15□□□□□ -0.14
BCKDHBP21953 GRPEL2P1-201ENST00000453145 339 ntBASIC14.15□□□□□ -0.14
BCKDHBP21953 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
BCKDHBP21953 RN7SL375P-201ENST00000492442 298 ntBASIC14.15□□□□□ -0.14
BCKDHBP21953 RN7SL767P-201ENST00000493013 295 ntBASIC14.15□□□□□ -0.14
BCKDHBP21953 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC14.15□□□□□ -0.14
BCKDHBP21953 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.15□□□□□ -0.14
BCKDHBP21953 VENTXP3-201ENST00000546480 773 ntBASIC14.15□□□□□ -0.14
BCKDHBP21953 SORD2P-201ENST00000558556 1069 ntBASIC14.15□□□□□ -0.14
BCKDHBP21953 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC14.15□□□□□ -0.14
BCKDHBP21953 AC008972.2-201ENST00000606587 494 ntBASIC14.15□□□□□ -0.14
BCKDHBP21953 AL139339.2-201ENST00000608063 657 ntBASIC14.15□□□□□ -0.14
BCKDHBP21953 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC14.15□□□□□ -0.14
BCKDHBP21953 MIR6746-201ENST00000620971 63 ntBASIC14.15□□□□□ -0.14
BCKDHBP21953 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BCKDHBP21953 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
BCKDHBP21953 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.15□□□□□ -0.14
BCKDHBP21953 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
BCKDHBP21953 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.15□□□□□ -0.14
BCKDHBP21953 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
BCKDHBP21953 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
BCKDHBP21953 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BCKDHBP21953 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.15□□□□□ -0.14
BCKDHBP21953 DBET-201ENST00000630918 3363 ntBASIC14.15□□□□□ -0.14
BCKDHBP21953 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
BCKDHBP21953 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
BCKDHBP21953 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
BCKDHBP21953 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
BCKDHBP21953 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
BCKDHBP21953 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
BCKDHBP21953 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.15□□□□□ -0.14
BCKDHBP21953 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.15□□□□□ -0.14
BCKDHBP21953 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
BCKDHBP21953 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
BCKDHBP21953 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BCKDHBP21953 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
BCKDHBP21953 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
BCKDHBP21953 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
BCKDHBP21953 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BCKDHBP21953 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
BCKDHBP21953 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
BCKDHBP21953 CCT8L1P-201ENST00000465400 1674 ntBASIC14.14□□□□□ -0.15
BCKDHBP21953 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms