Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCK1P16333 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.74□□□□□ -0.21
NCK1P16333 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NCK1P16333 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCK1P16333 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCK1P16333 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCK1P16333 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NCK1P16333 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NCK1P16333 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCK1P16333 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.74□□□□□ -0.21
NCK1P16333 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.74□□□□□ -0.21
NCK1P16333 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.74□□□□□ -0.21
NCK1P16333 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.74□□□□□ -0.21
NCK1P16333 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.74□□□□□ -0.21
NCK1P16333 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCK1P16333 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.74□□□□□ -0.21
NCK1P16333 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.74□□□□□ -0.21
NCK1P16333 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.74□□□□□ -0.21
NCK1P16333 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.74□□□□□ -0.21
NCK1P16333 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.74□□□□□ -0.21
NCK1P16333 AL359711.2-201ENST00000563105 872 ntBASIC13.74□□□□□ -0.21
NCK1P16333 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.74□□□□□ -0.21
NCK1P16333 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.74□□□□□ -0.21
NCK1P16333 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.74□□□□□ -0.21
NCK1P16333 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.74□□□□□ -0.21
NCK1P16333 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.74□□□□□ -0.21
NCK1P16333 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCK1P16333 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCK1P16333 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.74□□□□□ -0.21
NCK1P16333 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
NCK1P16333 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCK1P16333 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
NCK1P16333 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCK1P16333 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCK1P16333 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NCK1P16333 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
NCK1P16333 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
NCK1P16333 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NCK1P16333 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.74□□□□□ -0.21
NCK1P16333 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.74□□□□□ -0.21
NCK1P16333 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NCK1P16333 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
NCK1P16333 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.73□□□□□ -0.21
NCK1P16333 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NCK1P16333 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NCK1P16333 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC13.73□□□□□ -0.21
NCK1P16333 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
NCK1P16333 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NCK1P16333 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NCK1P16333 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NCK1P16333 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
NCK1P16333 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC13.73□□□□□ -0.21
NCK1P16333 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NCK1P16333 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
NCK1P16333 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NCK1P16333 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NCK1P16333 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NCK1P16333 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NCK1P16333 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NCK1P16333 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NCK1P16333 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
NCK1P16333 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NCK1P16333 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NCK1P16333 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.73□□□□□ -0.21
NCK1P16333 GNAQP1-201ENST00000444815 1067 ntBASIC13.73□□□□□ -0.21
NCK1P16333 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NCK1P16333 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
NCK1P16333 AC138696.2-201ENST00000607376 223 ntBASIC13.73□□□□□ -0.21
NCK1P16333 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.73□□□□□ -0.21
NCK1P16333 AC008761.3-201ENST00000624803 892 ntBASIC13.73□□□□□ -0.21
NCK1P16333 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NCK1P16333 AL590440.2-201ENST00000641973 1595 ntBASIC13.73□□□□□ -0.21
NCK1P16333 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
NCK1P16333 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NCK1P16333 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
NCK1P16333 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
NCK1P16333 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NCK1P16333 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NCK1P16333 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
NCK1P16333 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NCK1P16333 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NCK1P16333 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NCK1P16333 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
NCK1P16333 AC073869.1-201ENST00000415574 2762 ntBASIC13.72□□□□□ -0.21
NCK1P16333 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
NCK1P16333 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NCK1P16333 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
NCK1P16333 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NCK1P16333 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NCK1P16333 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NCK1P16333 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
NCK1P16333 AC125807.2-201ENST00000513358 3514 ntBASIC13.72□□□□□ -0.21
NCK1P16333 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NCK1P16333 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NCK1P16333 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.72□□□□□ -0.21
NCK1P16333 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NCK1P16333 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
NCK1P16333 AC064801.2-201ENST00000625052 1303 ntBASIC13.72□□□□□ -0.21
NCK1P16333 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NCK1P16333 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms