Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCL4P13236 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CCL4P13236 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
CCL4P13236 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCL4P13236 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCL4P13236 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCL4P13236 AC126177.1-201ENST00000547829 2218 ntBASIC13.52□□□□□ -0.24
CCL4P13236 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCL4P13236 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.52□□□□□ -0.24
CCL4P13236 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.52□□□□□ -0.24
CCL4P13236 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCL4P13236 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCL4P13236 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
CCL4P13236 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.52□□□□□ -0.24
CCL4P13236 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
CCL4P13236 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL4P13236 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCL4P13236 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL4P13236 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCL4P13236 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC13.52□□□□□ -0.25
CCL4P13236 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC13.52□□□□□ -0.25
CCL4P13236 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC13.52□□□□□ -0.25
CCL4P13236 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC13.52□□□□□ -0.25
CCL4P13236 RPL35P9-201ENST00000446059 350 ntBASIC13.52□□□□□ -0.25
CCL4P13236 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCL4P13236 RN7SL396P-201ENST00000471086 295 ntBASIC13.52□□□□□ -0.25
CCL4P13236 RN7SL564P-201ENST00000496309 250 ntBASIC13.52□□□□□ -0.25
CCL4P13236 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL4P13236 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.25
CCL4P13236 NAA40-205ENST00000539656 577 ntTSL 4 BASIC13.52□□□□□ -0.25
CCL4P13236 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC13.52□□□□□ -0.25
CCL4P13236 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCL4P13236 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC13.52□□□□□ -0.25
CCL4P13236 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.52□□□□□ -0.25
CCL4P13236 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC13.52□□□□□ -0.25
CCL4P13236 LINC00244-201ENST00000625073 613 ntBASIC13.52□□□□□ -0.25
CCL4P13236 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL4P13236 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CCL4P13236 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL4P13236 AL161772.1-201ENST00000610494 4412 ntBASIC13.52□□□□□ -0.25
CCL4P13236 AC021305.1-201ENST00000520656 1514 ntBASIC13.52□□□□□ -0.25
CCL4P13236 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.52□□□□□ -0.25
CCL4P13236 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC13.52□□□□□ -0.25
CCL4P13236 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCL4P13236 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL4P13236 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CCL4P13236 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.52□□□□□ -0.25
CCL4P13236 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL4P13236 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL4P13236 AC232323.1-201ENST00000540724 2099 ntBASIC13.52□□□□□ -0.25
CCL4P13236 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL4P13236 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CCL4P13236 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.52□□□□□ -0.25
CCL4P13236 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.52□□□□□ -0.25
CCL4P13236 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.52□□□□□ -0.25
CCL4P13236 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL4P13236 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL4P13236 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CCL4P13236 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCL4P13236 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL4P13236 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL4P13236 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CCL4P13236 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCL4P13236 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCL4P13236 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
CCL4P13236 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL4P13236 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL4P13236 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.51□□□□□ -0.25
CCL4P13236 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCL4P13236 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.51□□□□□ -0.25
CCL4P13236 AC011498.7-201ENST00000624986 2027 ntBASIC13.51□□□□□ -0.25
CCL4P13236 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.51□□□□□ -0.25
CCL4P13236 AC063926.3-201ENST00000624734 5658 ntBASIC13.51□□□□□ -0.25
CCL4P13236 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL4P13236 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL4P13236 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.51□□□□□ -0.25
CCL4P13236 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCL4P13236 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.51□□□□□ -0.25
CCL4P13236 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL4P13236 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCL4P13236 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCL4P13236 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCL4P13236 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCL4P13236 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC13.51□□□□□ -0.25
CCL4P13236 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CCL4P13236 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCL4P13236 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CCL4P13236 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCL4P13236 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CCL4P13236 MIR1227-201ENST00000408484 88 ntBASIC13.51□□□□□ -0.25
CCL4P13236 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCL4P13236 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC13.51□□□□□ -0.25
CCL4P13236 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC13.51□□□□□ -0.25
CCL4P13236 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC13.51□□□□□ -0.25
CCL4P13236 PPIA-208ENST00000489459 907 ntTSL 2 BASIC13.51□□□□□ -0.25
CCL4P13236 AC093909.3-201ENST00000504783 336 ntBASIC13.51□□□□□ -0.25
CCL4P13236 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC13.51□□□□□ -0.25
CCL4P13236 AC226150.1-201ENST00000544259 466 ntBASIC13.51□□□□□ -0.25
CCL4P13236 KLF17P1-201ENST00000547105 1126 ntBASIC13.51□□□□□ -0.25
CCL4P13236 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms