Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.02■□□□□ 0.32
TOP1P11387 RN7SL11P-201ENST00000471305 293 ntBASIC17.02■□□□□ 0.32
TOP1P11387 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.02■□□□□ 0.32
TOP1P11387 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.02■□□□□ 0.32
TOP1P11387 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.02■□□□□ 0.32
TOP1P11387 MIR6074-201ENST00000612054 107 ntBASIC17.02■□□□□ 0.32
TOP1P11387 AP001505.2-201ENST00000616815 443 ntBASIC17.02■□□□□ 0.32
TOP1P11387 AC092299.1-201ENST00000632679 757 ntBASIC17.02■□□□□ 0.32
TOP1P11387 NAP1L6-202ENST00000641404 1222 ntBASIC17.02■□□□□ 0.32
TOP1P11387 AC138627.1-207ENST00000641560 1006 ntBASIC17.02■□□□□ 0.32
TOP1P11387 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TOP1P11387 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TOP1P11387 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
TOP1P11387 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.02■□□□□ 0.31
TOP1P11387 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TOP1P11387 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TOP1P11387 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC17.02■□□□□ 0.31
TOP1P11387 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TOP1P11387 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
TOP1P11387 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC17.02■□□□□ 0.31
TOP1P11387 AC008132.1-202ENST00000342005 1389 ntBASIC17.02■□□□□ 0.31
TOP1P11387 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TOP1P11387 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TOP1P11387 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TOP1P11387 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TOP1P11387 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
TOP1P11387 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TOP1P11387 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TOP1P11387 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TOP1P11387 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TOP1P11387 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
TOP1P11387 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TOP1P11387 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC17.01■□□□□ 0.31
TOP1P11387 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TOP1P11387 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC17.01■□□□□ 0.31
TOP1P11387 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
TOP1P11387 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TOP1P11387 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TOP1P11387 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TOP1P11387 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TOP1P11387 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TOP1P11387 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TOP1P11387 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TOP1P11387 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TOP1P11387 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.01■□□□□ 0.31
TOP1P11387 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC17.01■□□□□ 0.31
TOP1P11387 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.01■□□□□ 0.31
TOP1P11387 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC17.01■□□□□ 0.31
TOP1P11387 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TOP1P11387 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC17.01■□□□□ 0.31
TOP1P11387 PGAM1P5-201ENST00000548011 764 ntBASIC17.01■□□□□ 0.31
TOP1P11387 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TOP1P11387 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC17.01■□□□□ 0.31
TOP1P11387 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
TOP1P11387 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TOP1P11387 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.01■□□□□ 0.31
TOP1P11387 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TOP1P11387 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC17.01■□□□□ 0.31
TOP1P11387 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TOP1P11387 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TOP1P11387 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
TOP1P11387 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TOP1P11387 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TOP1P11387 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TOP1P11387 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TOP1P11387 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC17.01■□□□□ 0.31
TOP1P11387 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TOP1P11387 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TOP1P11387 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TOP1P11387 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TOP1P11387 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TOP1P11387 KRT8P21-201ENST00000430398 1491 ntBASIC17■□□□□ 0.31
TOP1P11387 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TOP1P11387 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17■□□□□ 0.31
TOP1P11387 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17■□□□□ 0.31
TOP1P11387 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC17■□□□□ 0.31
TOP1P11387 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TOP1P11387 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
TOP1P11387 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC17■□□□□ 0.31
TOP1P11387 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TOP1P11387 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC17■□□□□ 0.31
TOP1P11387 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TOP1P11387 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TOP1P11387 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TOP1P11387 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TOP1P11387 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17■□□□□ 0.31
TOP1P11387 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TOP1P11387 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TOP1P11387 CMC1-204ENST00000423894 549 ntTSL 2 BASIC17■□□□□ 0.31
TOP1P11387 OR2R1P-201ENST00000441404 914 ntBASIC17■□□□□ 0.31
TOP1P11387 Z97180.1-201ENST00000445173 988 ntBASIC17■□□□□ 0.31
TOP1P11387 AL596276.2-201ENST00000447525 331 ntBASIC17■□□□□ 0.31
TOP1P11387 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
TOP1P11387 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TOP1P11387 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TOP1P11387 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TOP1P11387 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC17■□□□□ 0.31
TOP1P11387 AC005586.2-201ENST00000563946 837 ntBASIC17■□□□□ 0.31
TOP1P11387 AC124068.2-201ENST00000569473 1109 ntBASIC17■□□□□ 0.31
TOP1P11387 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms