Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHGAP10645 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHGAP10645 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHGAP10645 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CHGAP10645 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC20.62■□□□□ 0.89
CHGAP10645 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHGAP10645 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CHGAP10645 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC20.62■□□□□ 0.89
CHGAP10645 AC006987.1-201ENST00000413610 527 ntBASIC20.62■□□□□ 0.89
CHGAP10645 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHGAP10645 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHGAP10645 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC20.62■□□□□ 0.89
CHGAP10645 TREHP1-201ENST00000531328 465 ntBASIC20.62■□□□□ 0.89
CHGAP10645 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHGAP10645 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC20.62■□□□□ 0.89
CHGAP10645 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC20.62■□□□□ 0.89
CHGAP10645 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC20.62■□□□□ 0.89
CHGAP10645 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC20.62■□□□□ 0.89
CHGAP10645 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC20.62■□□□□ 0.89
CHGAP10645 GAS7-216ENST00000583882 553 ntTSL 5 BASIC20.62■□□□□ 0.89
CHGAP10645 AC010976.2-201ENST00000609697 852 ntBASIC20.62■□□□□ 0.89
CHGAP10645 HELLS-212ENST00000630929 400 ntTSL 5 BASIC20.62■□□□□ 0.89
CHGAP10645 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC20.62■□□□□ 0.89
CHGAP10645 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CHGAP10645 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC20.62■□□□□ 0.89
CHGAP10645 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
CHGAP10645 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
CHGAP10645 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHGAP10645 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHGAP10645 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHGAP10645 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHGAP10645 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC20.62■□□□□ 0.89
CHGAP10645 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC20.61■□□□□ 0.89
CHGAP10645 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHGAP10645 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHGAP10645 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHGAP10645 AC126755.1-201ENST00000525846 6405 ntBASIC20.61■□□□□ 0.89
CHGAP10645 CCT8L1P-201ENST00000465400 1674 ntBASIC20.61■□□□□ 0.89
CHGAP10645 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CHGAP10645 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CHGAP10645 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHGAP10645 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC20.61■□□□□ 0.89
CHGAP10645 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHGAP10645 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHGAP10645 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CHGAP10645 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHGAP10645 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC20.61■□□□□ 0.89
CHGAP10645 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC20.61■□□□□ 0.89
CHGAP10645 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC20.61■□□□□ 0.89
CHGAP10645 AL161932.2-201ENST00000435436 679 ntBASIC20.61■□□□□ 0.89
CHGAP10645 GNG10P1-201ENST00000452289 199 ntBASIC20.61■□□□□ 0.89
CHGAP10645 AC005740.1-201ENST00000515639 522 ntBASIC20.61■□□□□ 0.89
CHGAP10645 NAA40-205ENST00000539656 577 ntTSL 4 BASIC20.61■□□□□ 0.89
CHGAP10645 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHGAP10645 AC145285.5-201ENST00000562217 361 ntBASIC20.61■□□□□ 0.89
CHGAP10645 AC055811.3-201ENST00000584952 686 ntBASIC20.61■□□□□ 0.89
CHGAP10645 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC20.61■□□□□ 0.89
CHGAP10645 HMGB1P24-201ENST00000611897 328 ntBASIC20.61■□□□□ 0.89
CHGAP10645 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CHGAP10645 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHGAP10645 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHGAP10645 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHGAP10645 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHGAP10645 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHGAP10645 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHGAP10645 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
CHGAP10645 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CHGAP10645 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CHGAP10645 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC20.61■□□□□ 0.89
CHGAP10645 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
CHGAP10645 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHGAP10645 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHGAP10645 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHGAP10645 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC20.6■□□□□ 0.89
CHGAP10645 AC215219.1-201ENST00000400706 1817 ntBASIC20.6■□□□□ 0.89
CHGAP10645 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHGAP10645 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHGAP10645 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHGAP10645 LINC00115-201ENST00000473798 1317 ntBASIC20.6■□□□□ 0.89
CHGAP10645 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHGAP10645 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC20.6■□□□□ 0.89
CHGAP10645 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CHGAP10645 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHGAP10645 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHGAP10645 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CHGAP10645 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHGAP10645 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC20.6■□□□□ 0.89
CHGAP10645 SSR1P1-201ENST00000407630 814 ntBASIC20.6■□□□□ 0.89
CHGAP10645 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHGAP10645 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC20.6■□□□□ 0.89
CHGAP10645 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC20.6■□□□□ 0.89
CHGAP10645 RN7SL23P-201ENST00000484055 275 ntBASIC20.6■□□□□ 0.89
CHGAP10645 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC20.6■□□□□ 0.89
CHGAP10645 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC20.6■□□□□ 0.89
CHGAP10645 KLF17P1-201ENST00000547105 1126 ntBASIC20.6■□□□□ 0.89
CHGAP10645 KRT8P2-201ENST00000556193 944 ntBASIC20.6■□□□□ 0.89
CHGAP10645 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC20.6■□□□□ 0.89
CHGAP10645 MAX-218ENST00000557746 571 ntTSL 4 BASIC20.6■□□□□ 0.89
CHGAP10645 RN7SL596P-201ENST00000582123 288 ntBASIC20.6■□□□□ 0.89
CHGAP10645 NAMA-206ENST00000605377 509 ntTSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms