Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 SNX1-214ENST00000625244 324 ntTSL 5 BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RAB40ALP0C0E4 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 KRT18P9-201ENST00000604826 1300 ntBASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 OR2K2-202ENST00000374428 1038 ntBASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 BANF1P3-201ENST00000412556 261 ntBASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 ST13P19-201ENST00000442505 1124 ntBASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 AC124068.2-201ENST00000569473 1109 ntBASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 MIR3677-201ENST00000578964 60 ntBASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB40ALP0C0E4 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
RAB40ALP0C0E4 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
RAB40ALP0C0E4 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.65□□□□□ -0.23
RAB40ALP0C0E4 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB40ALP0C0E4 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms