Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CD48P09326 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.98□□□□□ -0.01
CD48P09326 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CD48P09326 HSPB1P2-201ENST00000448722 546 ntBASIC14.98□□□□□ -0.01
CD48P09326 IGHV3-71-201ENST00000523324 359 ntBASIC14.98□□□□□ -0.01
CD48P09326 AL160314.3-201ENST00000556041 767 ntBASIC14.98□□□□□ -0.01
CD48P09326 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.98□□□□□ -0.01
CD48P09326 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.98□□□□□ -0.01
CD48P09326 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CD48P09326 AC017083.2-201ENST00000608069 979 ntBASIC14.98□□□□□ -0.01
CD48P09326 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CD48P09326 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.98□□□□□ -0.01
CD48P09326 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.98□□□□□ -0.01
CD48P09326 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD48P09326 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.98□□□□□ -0.01
CD48P09326 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD48P09326 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD48P09326 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CD48P09326 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD48P09326 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD48P09326 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD48P09326 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD48P09326 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD48P09326 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD48P09326 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD48P09326 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.98□□□□□ -0.01
CD48P09326 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CD48P09326 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD48P09326 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CD48P09326 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.98□□□□□ -0.01
CD48P09326 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD48P09326 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CD48P09326 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CD48P09326 AC015818.8-201ENST00000587907 1519 ntBASIC14.97□□□□□ -0.01
CD48P09326 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.97□□□□□ -0.01
CD48P09326 AC072061.1-201ENST00000569710 2234 ntBASIC14.97□□□□□ -0.01
CD48P09326 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CD48P09326 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CD48P09326 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD48P09326 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD48P09326 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CD48P09326 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
CD48P09326 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD48P09326 AC105206.1-202ENST00000314927 2368 ntBASIC14.97□□□□□ -0.01
CD48P09326 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CD48P09326 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.97□□□□□ -0.01
CD48P09326 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.97□□□□□ -0.01
CD48P09326 CICP20-201ENST00000443330 2801 ntBASIC14.97□□□□□ -0.01
CD48P09326 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.97□□□□□ -0.01
CD48P09326 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD48P09326 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD48P09326 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CD48P09326 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.97□□□□□ -0.01
CD48P09326 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CD48P09326 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CD48P09326 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
CD48P09326 AC006122.1-201ENST00000493323 440 ntBASIC14.97□□□□□ -0.01
CD48P09326 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.97□□□□□ -0.01
CD48P09326 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
CD48P09326 AC010328.2-201ENST00000597698 1111 ntBASIC14.97□□□□□ -0.01
CD48P09326 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.97□□□□□ -0.01
CD48P09326 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.97□□□□□ -0.01
CD48P09326 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.97□□□□□ -0.01
CD48P09326 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CD48P09326 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CD48P09326 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CD48P09326 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD48P09326 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.97□□□□□ -0.01
CD48P09326 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.97□□□□□ -0.01
CD48P09326 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CD48P09326 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CD48P09326 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CD48P09326 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CD48P09326 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD48P09326 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CD48P09326 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CD48P09326 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CD48P09326 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.96□□□□□ -0.01
CD48P09326 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.96□□□□□ -0.01
CD48P09326 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD48P09326 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD48P09326 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.96□□□□□ -0.01
CD48P09326 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD48P09326 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CD48P09326 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CD48P09326 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.96□□□□□ -0.01
CD48P09326 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.96□□□□□ -0.01
CD48P09326 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CD48P09326 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.96□□□□□ -0.01
CD48P09326 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
CD48P09326 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD48P09326 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CD48P09326 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD48P09326 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD48P09326 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD48P09326 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD48P09326 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CD48P09326 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD48P09326 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.96□□□□□ -0.01
CD48P09326 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms