Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD74P04233 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD74P04233 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD74P04233 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD74P04233 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD74P04233 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD74P04233 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD74P04233 AC115284.2-201ENST00000624646 2054 ntBASIC12.2□□□□□ -0.46
CD74P04233 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.2□□□□□ -0.46
CD74P04233 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
CD74P04233 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CD74P04233 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.2□□□□□ -0.46
CD74P04233 MSNP1-201ENST00000511640 1732 ntBASIC12.2□□□□□ -0.46
CD74P04233 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CD74P04233 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
CD74P04233 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CD74P04233 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.19□□□□□ -0.46
CD74P04233 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD74P04233 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
CD74P04233 AL031595.1-201ENST00000623969 4709 ntBASIC12.19□□□□□ -0.46
CD74P04233 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD74P04233 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CD74P04233 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD74P04233 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD74P04233 LINC02486-201ENST00000604157 3000 ntBASIC12.19□□□□□ -0.46
CD74P04233 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.19□□□□□ -0.46
CD74P04233 CICP1-201ENST00000416803 2410 ntBASIC12.19□□□□□ -0.46
CD74P04233 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.19□□□□□ -0.46
CD74P04233 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CD74P04233 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.19□□□□□ -0.46
CD74P04233 AC004623.1-201ENST00000624592 2127 ntBASIC12.19□□□□□ -0.46
CD74P04233 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CD74P04233 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD74P04233 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CD74P04233 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD74P04233 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.19□□□□□ -0.46
CD74P04233 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD74P04233 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CD74P04233 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CD74P04233 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD74P04233 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
CD74P04233 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD74P04233 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.19□□□□□ -0.46
CD74P04233 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC12.19□□□□□ -0.46
CD74P04233 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.19□□□□□ -0.46
CD74P04233 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD74P04233 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.19□□□□□ -0.46
CD74P04233 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD74P04233 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD74P04233 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.19□□□□□ -0.46
CD74P04233 AC069120.2-201ENST00000524091 540 ntBASIC12.19□□□□□ -0.46
CD74P04233 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CD74P04233 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.19□□□□□ -0.46
CD74P04233 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.19□□□□□ -0.46
CD74P04233 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.19□□□□□ -0.46
CD74P04233 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.19□□□□□ -0.46
CD74P04233 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.19□□□□□ -0.46
CD74P04233 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.19□□□□□ -0.46
CD74P04233 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CD74P04233 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC12.19□□□□□ -0.46
CD74P04233 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.19□□□□□ -0.46
CD74P04233 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.19□□□□□ -0.46
CD74P04233 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD74P04233 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CD74P04233 INTS4P2-202ENST00000614726 2019 ntBASIC12.19□□□□□ -0.46
CD74P04233 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD74P04233 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD74P04233 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC12.19□□□□□ -0.46
CD74P04233 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.19□□□□□ -0.46
CD74P04233 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD74P04233 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.19□□□□□ -0.46
CD74P04233 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD74P04233 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD74P04233 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD74P04233 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CD74P04233 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.19□□□□□ -0.46
CD74P04233 AL022323.5-201ENST00000624101 2059 ntBASIC12.18□□□□□ -0.46
CD74P04233 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD74P04233 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
CD74P04233 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CD74P04233 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.18□□□□□ -0.46
CD74P04233 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD74P04233 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD74P04233 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD74P04233 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CD74P04233 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD74P04233 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.18□□□□□ -0.46
CD74P04233 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD74P04233 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CD74P04233 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD74P04233 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CD74P04233 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD74P04233 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.18□□□□□ -0.46
CD74P04233 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD74P04233 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD74P04233 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.18□□□□□ -0.46
CD74P04233 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
CD74P04233 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.18□□□□□ -0.46
CD74P04233 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD74P04233 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms