Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.73□□□□□ -0.21
MT-ND1P03886 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
MT-ND1P03886 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
MT-ND1P03886 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
MT-ND1P03886 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.73□□□□□ -0.21
MT-ND1P03886 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MT-ND1P03886 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
MT-ND1P03886 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MT-ND1P03886 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MT-ND1P03886 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
MT-ND1P03886 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.73□□□□□ -0.21
MT-ND1P03886 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
MT-ND1P03886 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MT-ND1P03886 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
MT-ND1P03886 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.73□□□□□ -0.21
MT-ND1P03886 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
MT-ND1P03886 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.73□□□□□ -0.21
MT-ND1P03886 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.73□□□□□ -0.21
MT-ND1P03886 EIF3FP3-201ENST00000434851 1086 ntBASIC13.73□□□□□ -0.21
MT-ND1P03886 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
MT-ND1P03886 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.73□□□□□ -0.21
MT-ND1P03886 AC093004.1-201ENST00000508850 424 ntBASIC13.73□□□□□ -0.21
MT-ND1P03886 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.73□□□□□ -0.21
MT-ND1P03886 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.73□□□□□ -0.21
MT-ND1P03886 AC005498.2-205ENST00000593218 784 ntBASIC13.73□□□□□ -0.21
MT-ND1P03886 AC004466.1-201ENST00000599515 1080 ntBASIC13.73□□□□□ -0.21
MT-ND1P03886 AC099568.2-201ENST00000609194 695 ntBASIC13.73□□□□□ -0.21
MT-ND1P03886 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.73□□□□□ -0.21
MT-ND1P03886 AC007431.3-201ENST00000623221 587 ntBASIC13.73□□□□□ -0.21
MT-ND1P03886 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
MT-ND1P03886 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MT-ND1P03886 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
MT-ND1P03886 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
MT-ND1P03886 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
MT-ND1P03886 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MT-ND1P03886 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
MT-ND1P03886 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
MT-ND1P03886 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.73□□□□□ -0.21
MT-ND1P03886 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MT-ND1P03886 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MT-ND1P03886 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
MT-ND1P03886 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MT-ND1P03886 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
MT-ND1P03886 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
MT-ND1P03886 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MT-ND1P03886 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
MT-ND1P03886 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
MT-ND1P03886 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.73□□□□□ -0.21
MT-ND1P03886 CARS-214ENST00000529772 2637 ntTSL 2 BASIC13.73□□□□□ -0.21
MT-ND1P03886 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
MT-ND1P03886 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MT-ND1P03886 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.73□□□□□ -0.21
MT-ND1P03886 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
MT-ND1P03886 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
MT-ND1P03886 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MT-ND1P03886 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MT-ND1P03886 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MT-ND1P03886 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.72□□□□□ -0.21
MT-ND1P03886 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
MT-ND1P03886 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
MT-ND1P03886 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MT-ND1P03886 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MT-ND1P03886 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC13.72□□□□□ -0.21
MT-ND1P03886 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.72□□□□□ -0.21
MT-ND1P03886 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
MT-ND1P03886 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
MT-ND1P03886 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MT-ND1P03886 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.72□□□□□ -0.21
MT-ND1P03886 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MT-ND1P03886 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MT-ND1P03886 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MT-ND1P03886 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
MT-ND1P03886 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
MT-ND1P03886 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.72□□□□□ -0.21
MT-ND1P03886 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MT-ND1P03886 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
MT-ND1P03886 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
MT-ND1P03886 AC134915.1-201ENST00000426461 574 ntBASIC13.72□□□□□ -0.21
MT-ND1P03886 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
MT-ND1P03886 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.72□□□□□ -0.21
MT-ND1P03886 AC104596.2-201ENST00000512793 793 ntBASIC13.72□□□□□ -0.21
MT-ND1P03886 AC055876.2-201ENST00000531834 546 ntBASIC13.72□□□□□ -0.21
MT-ND1P03886 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.72□□□□□ -0.21
MT-ND1P03886 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.72□□□□□ -0.21
MT-ND1P03886 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MT-ND1P03886 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.72□□□□□ -0.21
MT-ND1P03886 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MT-ND1P03886 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
MT-ND1P03886 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.72□□□□□ -0.21
MT-ND1P03886 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.72□□□□□ -0.21
MT-ND1P03886 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MT-ND1P03886 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.72□□□□□ -0.21
MT-ND1P03886 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
MT-ND1P03886 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MT-ND1P03886 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MT-ND1P03886 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MT-ND1P03886 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MT-ND1P03886 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MT-ND1P03886 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MT-ND1P03886 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms