Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HLA-AP01891 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.3□□□□□ -0.44
HLA-AP01891 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.3□□□□□ -0.44
HLA-AP01891 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC12.3□□□□□ -0.44
HLA-AP01891 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.3□□□□□ -0.44
HLA-AP01891 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-AP01891 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-AP01891 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.3□□□□□ -0.44
HLA-AP01891 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-AP01891 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-AP01891 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
HLA-AP01891 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-AP01891 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-AP01891 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.3□□□□□ -0.44
HLA-AP01891 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.3□□□□□ -0.44
HLA-AP01891 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
HLA-AP01891 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-AP01891 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
HLA-AP01891 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
HLA-AP01891 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-AP01891 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
HLA-AP01891 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-AP01891 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
HLA-AP01891 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-AP01891 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-AP01891 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-AP01891 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.3□□□□□ -0.44
HLA-AP01891 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-AP01891 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-AP01891 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-AP01891 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-AP01891 MIR943-201ENST00000401286 94 ntBASIC12.3□□□□□ -0.44
HLA-AP01891 TREML5P-201ENST00000421694 576 ntBASIC12.3□□□□□ -0.44
HLA-AP01891 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-AP01891 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.3□□□□□ -0.44
HLA-AP01891 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-AP01891 IGHV3-42-201ENST00000520410 361 ntBASIC12.3□□□□□ -0.44
HLA-AP01891 AC069120.2-201ENST00000524091 540 ntBASIC12.3□□□□□ -0.44
HLA-AP01891 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
HLA-AP01891 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
HLA-AP01891 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
HLA-AP01891 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-AP01891 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC12.3□□□□□ -0.44
HLA-AP01891 AC093512.1-201ENST00000617969 520 ntBASIC12.3□□□□□ -0.44
HLA-AP01891 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-AP01891 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
HLA-AP01891 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-AP01891 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-AP01891 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
HLA-AP01891 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-AP01891 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC12.3□□□□□ -0.44
HLA-AP01891 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-AP01891 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-AP01891 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-AP01891 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.3□□□□□ -0.44
HLA-AP01891 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-AP01891 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-AP01891 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-AP01891 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
HLA-AP01891 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.3□□□□□ -0.44
HLA-AP01891 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-AP01891 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-AP01891 TNRC18P1-201ENST00000502875 3650 ntBASIC12.3□□□□□ -0.44
HLA-AP01891 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-AP01891 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
HLA-AP01891 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.3□□□□□ -0.44
HLA-AP01891 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC12.29□□□□□ -0.44
HLA-AP01891 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-AP01891 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.29□□□□□ -0.44
HLA-AP01891 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-AP01891 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.29□□□□□ -0.44
HLA-AP01891 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-AP01891 CES1P1-201ENST00000421606 1704 ntBASIC12.29□□□□□ -0.44
HLA-AP01891 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
HLA-AP01891 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
HLA-AP01891 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-AP01891 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-AP01891 SALL4P5-201ENST00000419001 1760 ntBASIC12.29□□□□□ -0.44
HLA-AP01891 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-AP01891 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-AP01891 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-AP01891 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-AP01891 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC12.29□□□□□ -0.44
HLA-AP01891 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
HLA-AP01891 RPL37AP1-201ENST00000412502 279 ntBASIC12.29□□□□□ -0.44
HLA-AP01891 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.29□□□□□ -0.44
HLA-AP01891 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
HLA-AP01891 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC12.29□□□□□ -0.44
HLA-AP01891 AC027369.6-201ENST00000525520 931 ntBASIC12.29□□□□□ -0.44
HLA-AP01891 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.29□□□□□ -0.44
HLA-AP01891 AC051619.7-201ENST00000568314 623 ntBASIC12.29□□□□□ -0.44
HLA-AP01891 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
HLA-AP01891 AL138828.2-201ENST00000615812 383 ntBASIC12.29□□□□□ -0.44
HLA-AP01891 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
HLA-AP01891 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
HLA-AP01891 AL033527.5-202ENST00000641632 1098 ntBASIC12.29□□□□□ -0.44
HLA-AP01891 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-AP01891 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.29□□□□□ -0.44
HLA-AP01891 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
HLA-AP01891 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms