Protein–RNA interactions for Protein: P00736

C1R, Complement C1r subcomponent, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1RP00736 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC15.18■□□□□ 0.02
C1RP00736 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C1RP00736 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.18■□□□□ 0.02
C1RP00736 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C1RP00736 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C1RP00736 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
C1RP00736 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC15.18■□□□□ 0.02
C1RP00736 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
C1RP00736 AC023908.3-201ENST00000564211 3047 ntBASIC15.18■□□□□ 0.02
C1RP00736 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C1RP00736 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
C1RP00736 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
C1RP00736 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC15.18■□□□□ 0.02
C1RP00736 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C1RP00736 MIR645-201ENST00000385283 94 ntBASIC15.18■□□□□ 0.02
C1RP00736 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
C1RP00736 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC15.18■□□□□ 0.02
C1RP00736 AC097065.1-201ENST00000425737 517 ntBASIC15.18■□□□□ 0.02
C1RP00736 AC012362.1-201ENST00000434906 739 ntBASIC15.18■□□□□ 0.02
C1RP00736 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC15.18■□□□□ 0.02
C1RP00736 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC15.18■□□□□ 0.02
C1RP00736 MT3-203ENST00000565838 421 ntTSL 3 BASIC15.18■□□□□ 0.02
C1RP00736 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC15.18■□□□□ 0.02
C1RP00736 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.18■□□□□ 0.02
C1RP00736 MIR6074-201ENST00000612054 107 ntBASIC15.18■□□□□ 0.02
C1RP00736 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC15.18■□□□□ 0.02
C1RP00736 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC15.18■□□□□ 0.02
C1RP00736 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
C1RP00736 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
C1RP00736 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
C1RP00736 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC15.18■□□□□ 0.02
C1RP00736 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
C1RP00736 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C1RP00736 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C1RP00736 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C1RP00736 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.18■□□□□ 0.02
C1RP00736 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.18■□□□□ 0.02
C1RP00736 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
C1RP00736 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
C1RP00736 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.18■□□□□ 0.02
C1RP00736 FGD5P1-202ENST00000614866 2498 ntBASIC15.18■□□□□ 0.02
C1RP00736 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
C1RP00736 AC015688.4-201ENST00000580780 1647 ntBASIC15.17■□□□□ 0.02
C1RP00736 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1RP00736 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C1RP00736 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C1RP00736 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1RP00736 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.17■□□□□ 0.02
C1RP00736 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1RP00736 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.17■□□□□ 0.02
C1RP00736 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1RP00736 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.17■□□□□ 0.02
C1RP00736 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C1RP00736 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1RP00736 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C1RP00736 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1RP00736 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C1RP00736 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1RP00736 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC15.17■□□□□ 0.02
C1RP00736 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.17■□□□□ 0.02
C1RP00736 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C1RP00736 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1RP00736 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1RP00736 BAX-205ENST00000391871 687 ntTSL 5 BASIC15.17■□□□□ 0.02
C1RP00736 LINC00265-2P-201ENST00000413372 782 ntBASIC15.17■□□□□ 0.02
C1RP00736 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC15.17■□□□□ 0.02
C1RP00736 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC15.17■□□□□ 0.02
C1RP00736 ERP29P1-201ENST00000442902 706 ntBASIC15.17■□□□□ 0.02
C1RP00736 RPS23-204ENST00000507980 836 ntTSL 2 BASIC15.17■□□□□ 0.02
C1RP00736 ALG1L6P-201ENST00000515248 758 ntBASIC15.17■□□□□ 0.02
C1RP00736 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC15.17■□□□□ 0.02
C1RP00736 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
C1RP00736 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
C1RP00736 AL161773.1-201ENST00000624845 863 ntBASIC15.17■□□□□ 0.02
C1RP00736 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1RP00736 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1RP00736 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
C1RP00736 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C1RP00736 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1RP00736 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.17■□□□□ 0.02
C1RP00736 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
C1RP00736 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C1RP00736 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C1RP00736 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1RP00736 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1RP00736 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.17■□□□□ 0.02
C1RP00736 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.17■□□□□ 0.02
C1RP00736 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
C1RP00736 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
C1RP00736 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC15.17■□□□□ 0.02
C1RP00736 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
C1RP00736 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
C1RP00736 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC15.16■□□□□ 0.02
C1RP00736 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C1RP00736 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C1RP00736 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C1RP00736 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
C1RP00736 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
C1RP00736 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C1RP00736 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms