Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SSSCA1O60232 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC11.87□□□□□ -0.51
SSSCA1O60232 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SSSCA1O60232 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SSSCA1O60232 AC005014.1-201ENST00000432006 2976 ntBASIC11.87□□□□□ -0.51
SSSCA1O60232 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SSSCA1O60232 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC11.87□□□□□ -0.51
SSSCA1O60232 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SSSCA1O60232 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
SSSCA1O60232 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
SSSCA1O60232 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SSSCA1O60232 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
SSSCA1O60232 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
SSSCA1O60232 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SSSCA1O60232 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
SSSCA1O60232 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SSSCA1O60232 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC11.86□□□□□ -0.51
SSSCA1O60232 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SSSCA1O60232 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SSSCA1O60232 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SSSCA1O60232 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC11.86□□□□□ -0.51
SSSCA1O60232 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SSSCA1O60232 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SSSCA1O60232 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
SSSCA1O60232 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SSSCA1O60232 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SSSCA1O60232 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
SSSCA1O60232 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
SSSCA1O60232 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SSSCA1O60232 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC11.86□□□□□ -0.51
SSSCA1O60232 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
SSSCA1O60232 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SSSCA1O60232 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC11.86□□□□□ -0.51
SSSCA1O60232 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC11.86□□□□□ -0.51
SSSCA1O60232 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SSSCA1O60232 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
SSSCA1O60232 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
SSSCA1O60232 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SSSCA1O60232 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC11.86□□□□□ -0.51
SSSCA1O60232 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SSSCA1O60232 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC11.86□□□□□ -0.51
SSSCA1O60232 VDAC1P7-201ENST00000462417 847 ntBASIC11.86□□□□□ -0.51
SSSCA1O60232 POLD2P1-201ENST00000511220 997 ntBASIC11.86□□□□□ -0.51
SSSCA1O60232 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC11.86□□□□□ -0.51
SSSCA1O60232 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC11.86□□□□□ -0.51
SSSCA1O60232 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
SSSCA1O60232 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SSSCA1O60232 AC073592.8-201ENST00000624126 511 ntBASIC11.86□□□□□ -0.51
SSSCA1O60232 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC11.86□□□□□ -0.51
SSSCA1O60232 RAB34-223ENST00000636154 730 ntTSL 2 BASIC11.86□□□□□ -0.51
SSSCA1O60232 PRSS30P-206ENST00000641773 873 ntBASIC11.86□□□□□ -0.51
SSSCA1O60232 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SSSCA1O60232 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SSSCA1O60232 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SSSCA1O60232 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC11.86□□□□□ -0.51
SSSCA1O60232 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC11.86□□□□□ -0.51
SSSCA1O60232 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SSSCA1O60232 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
SSSCA1O60232 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SSSCA1O60232 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC11.86□□□□□ -0.51
SSSCA1O60232 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
SSSCA1O60232 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC11.86□□□□□ -0.51
SSSCA1O60232 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC11.86□□□□□ -0.51
SSSCA1O60232 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SSSCA1O60232 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SSSCA1O60232 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SSSCA1O60232 EML1-203ENST00000334192 4064 ntTSL 5 BASIC11.86□□□□□ -0.51
SSSCA1O60232 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SSSCA1O60232 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SSSCA1O60232 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC11.86□□□□□ -0.51
SSSCA1O60232 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
SSSCA1O60232 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC11.86□□□□□ -0.51
SSSCA1O60232 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC11.86□□□□□ -0.51
SSSCA1O60232 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SSSCA1O60232 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SSSCA1O60232 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC11.86□□□□□ -0.51
SSSCA1O60232 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SSSCA1O60232 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC11.86□□□□□ -0.51
SSSCA1O60232 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SSSCA1O60232 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
SSSCA1O60232 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SSSCA1O60232 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
SSSCA1O60232 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SSSCA1O60232 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC11.85□□□□□ -0.51
SSSCA1O60232 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
SSSCA1O60232 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SSSCA1O60232 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC11.85□□□□□ -0.51
SSSCA1O60232 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SSSCA1O60232 LINC00567-201ENST00000569854 3409 ntBASIC11.85□□□□□ -0.51
SSSCA1O60232 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SSSCA1O60232 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SSSCA1O60232 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SSSCA1O60232 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
SSSCA1O60232 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
SSSCA1O60232 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
SSSCA1O60232 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SSSCA1O60232 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SSSCA1O60232 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC11.85□□□□□ -0.51
SSSCA1O60232 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC11.85□□□□□ -0.51
SSSCA1O60232 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms