Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
O00370 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
O00370 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
O00370 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
O00370 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.46■□□□□ 0.06
O00370 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
O00370 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.06
O00370 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.46■□□□□ 0.06
O00370 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
O00370 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.46■□□□□ 0.06
O00370 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
O00370 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
O00370 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC15.45■□□□□ 0.06
O00370 AC067750.1-201ENST00000608826 6545 ntBASIC15.45■□□□□ 0.06
O00370 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
O00370 CYP4F23P-201ENST00000593402 1579 ntBASIC15.45■□□□□ 0.06
O00370 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
O00370 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.45■□□□□ 0.06
O00370 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
O00370 CICP20-201ENST00000443330 2801 ntBASIC15.45■□□□□ 0.06
O00370 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
O00370 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC15.45■□□□□ 0.06
O00370 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.45■□□□□ 0.06
O00370 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
O00370 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.45■□□□□ 0.06
O00370 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
O00370 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
O00370 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
O00370 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
O00370 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.45■□□□□ 0.06
O00370 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
O00370 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.45■□□□□ 0.06
O00370 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.45■□□□□ 0.06
O00370 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
O00370 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.45■□□□□ 0.06
O00370 VDAC1P1-201ENST00000439229 848 ntBASIC15.45■□□□□ 0.06
O00370 AC244107.1-201ENST00000442033 332 ntBASIC15.45■□□□□ 0.06
O00370 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.45■□□□□ 0.06
O00370 AC006122.1-201ENST00000493323 440 ntBASIC15.45■□□□□ 0.06
O00370 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.45■□□□□ 0.06
O00370 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.45■□□□□ 0.06
O00370 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
O00370 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.45■□□□□ 0.06
O00370 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.45■□□□□ 0.06
O00370 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
O00370 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.45■□□□□ 0.06
O00370 AC104506.1-201ENST00000609247 429 ntBASIC15.45■□□□□ 0.06
O00370 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
O00370 AL008638.5-201ENST00000623814 1298 ntBASIC15.45■□□□□ 0.06
O00370 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
O00370 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
O00370 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
O00370 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
O00370 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
O00370 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC15.45■□□□□ 0.06
O00370 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
O00370 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.45■□□□□ 0.06
O00370 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
O00370 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
O00370 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC15.45■□□□□ 0.06
O00370 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.45■□□□□ 0.06
O00370 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
O00370 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
O00370 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
O00370 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
O00370 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
O00370 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15.44■□□□□ 0.06
O00370 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
O00370 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.44■□□□□ 0.06
O00370 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
O00370 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
O00370 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
O00370 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
O00370 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC15.44■□□□□ 0.06
O00370 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
O00370 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
O00370 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
O00370 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
O00370 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.44■□□□□ 0.06
O00370 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
O00370 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
O00370 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
O00370 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.44■□□□□ 0.06
O00370 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.44■□□□□ 0.06
O00370 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.44■□□□□ 0.06
O00370 AC104306.2-201ENST00000451877 341 ntBASIC15.44■□□□□ 0.06
O00370 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.44■□□□□ 0.06
O00370 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
O00370 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
O00370 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
O00370 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.44■□□□□ 0.06
O00370 AP000346.4-201ENST00000614827 381 ntBASIC15.44■□□□□ 0.06
O00370 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
O00370 AC020910.6-201ENST00000623084 1459 ntBASIC15.44■□□□□ 0.06
O00370 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.44■□□□□ 0.06
O00370 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
O00370 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
O00370 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.44■□□□□ 0.06
O00370 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.44■□□□□ 0.06
O00370 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms