Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 RFPL4AP1-201ENST00000530883 850 ntBASIC15.82■□□□□ 0.12
CCDC66A2RUB6 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 DUX4L27-201ENST00000554796 1261 ntBASIC15.82■□□□□ 0.12
CCDC66A2RUB6 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 PRSS30P-206ENST00000641773 873 ntBASIC15.82■□□□□ 0.12
CCDC66A2RUB6 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 AC022144.1-201ENST00000602255 1580 ntBASIC15.82■□□□□ 0.12
CCDC66A2RUB6 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 AGGF1P1-201ENST00000509500 2073 ntBASIC15.82■□□□□ 0.12
CCDC66A2RUB6 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC66A2RUB6 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 RN7SL399P-201ENST00000471648 279 ntBASIC15.81■□□□□ 0.12
CCDC66A2RUB6 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 AL662799.1-202ENST00000614205 422 ntBASIC15.81■□□□□ 0.12
CCDC66A2RUB6 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC66A2RUB6 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms