Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
BIVM-ERCC5R4GMW8 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
BIVM-ERCC5R4GMW8 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
BIVM-ERCC5R4GMW8 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC23.17■■□□□ 1.3
BIVM-ERCC5R4GMW8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
BIVM-ERCC5R4GMW8 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
BIVM-ERCC5R4GMW8 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC23.16■■□□□ 1.3
BIVM-ERCC5R4GMW8 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
BIVM-ERCC5R4GMW8 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC23.16■■□□□ 1.3
BIVM-ERCC5R4GMW8 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
BIVM-ERCC5R4GMW8 OR7E155P-201ENST00000412208 1014 ntBASIC23.16■■□□□ 1.3
BIVM-ERCC5R4GMW8 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC23.16■■□□□ 1.3
BIVM-ERCC5R4GMW8 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
BIVM-ERCC5R4GMW8 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC23.16■■□□□ 1.3
BIVM-ERCC5R4GMW8 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC23.16■■□□□ 1.3
BIVM-ERCC5R4GMW8 METTL7AP1-201ENST00000547343 496 ntBASIC23.16■■□□□ 1.3
BIVM-ERCC5R4GMW8 AC004801.1-201ENST00000549557 360 ntBASIC23.16■■□□□ 1.3
BIVM-ERCC5R4GMW8 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC23.16■■□□□ 1.3
BIVM-ERCC5R4GMW8 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC23.16■■□□□ 1.3
BIVM-ERCC5R4GMW8 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC23.16■■□□□ 1.3
BIVM-ERCC5R4GMW8 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC23.16■■□□□ 1.3
BIVM-ERCC5R4GMW8 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC23.16■■□□□ 1.3
BIVM-ERCC5R4GMW8 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
BIVM-ERCC5R4GMW8 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
BIVM-ERCC5R4GMW8 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
BIVM-ERCC5R4GMW8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
BIVM-ERCC5R4GMW8 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
BIVM-ERCC5R4GMW8 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
BIVM-ERCC5R4GMW8 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
BIVM-ERCC5R4GMW8 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
BIVM-ERCC5R4GMW8 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
BIVM-ERCC5R4GMW8 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC23.15■■□□□ 1.3
BIVM-ERCC5R4GMW8 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
BIVM-ERCC5R4GMW8 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC23.15■■□□□ 1.3
BIVM-ERCC5R4GMW8 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC23.15■■□□□ 1.3
BIVM-ERCC5R4GMW8 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC23.15■■□□□ 1.3
BIVM-ERCC5R4GMW8 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC23.15■■□□□ 1.3
BIVM-ERCC5R4GMW8 AC123912.6-201ENST00000612657 315 ntBASIC23.15■■□□□ 1.3
BIVM-ERCC5R4GMW8 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC23.15■■□□□ 1.3
BIVM-ERCC5R4GMW8 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC23.15■■□□□ 1.3
BIVM-ERCC5R4GMW8 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
BIVM-ERCC5R4GMW8 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
BIVM-ERCC5R4GMW8 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
BIVM-ERCC5R4GMW8 GOLGA8EP-201ENST00000530246 1959 ntBASIC23.15■■□□□ 1.3
BIVM-ERCC5R4GMW8 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
BIVM-ERCC5R4GMW8 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
BIVM-ERCC5R4GMW8 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
BIVM-ERCC5R4GMW8 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
BIVM-ERCC5R4GMW8 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC23.15■■□□□ 1.3
BIVM-ERCC5R4GMW8 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC23.15■■□□□ 1.3
BIVM-ERCC5R4GMW8 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
BIVM-ERCC5R4GMW8 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
BIVM-ERCC5R4GMW8 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
BIVM-ERCC5R4GMW8 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
BIVM-ERCC5R4GMW8 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
BIVM-ERCC5R4GMW8 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC23.15■■□□□ 1.3
BIVM-ERCC5R4GMW8 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC23.15■■□□□ 1.3
BIVM-ERCC5R4GMW8 CASP16P-204ENST00000635032 809 ntBASIC23.15■■□□□ 1.3
BIVM-ERCC5R4GMW8 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
BIVM-ERCC5R4GMW8 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
BIVM-ERCC5R4GMW8 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
BIVM-ERCC5R4GMW8 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
BIVM-ERCC5R4GMW8 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC23.15■■□□□ 1.3
BIVM-ERCC5R4GMW8 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
BIVM-ERCC5R4GMW8 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC23.15■■□□□ 1.3
BIVM-ERCC5R4GMW8 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
BIVM-ERCC5R4GMW8 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
BIVM-ERCC5R4GMW8 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
BIVM-ERCC5R4GMW8 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
BIVM-ERCC5R4GMW8 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
BIVM-ERCC5R4GMW8 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
BIVM-ERCC5R4GMW8 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC23.14■■□□□ 1.29
BIVM-ERCC5R4GMW8 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC23.14■■□□□ 1.29
BIVM-ERCC5R4GMW8 RNLS-203ENST00000437752 525 ntTSL 2 BASIC23.14■■□□□ 1.29
BIVM-ERCC5R4GMW8 HNRNPA1P10-201ENST00000444945 962 ntBASIC23.14■■□□□ 1.29
BIVM-ERCC5R4GMW8 PSME2P2-201ENST00000453033 700 ntBASIC23.14■■□□□ 1.29
BIVM-ERCC5R4GMW8 RN7SL523P-201ENST00000484401 298 ntBASIC23.14■■□□□ 1.29
BIVM-ERCC5R4GMW8 SRP14-208ENST00000560773 468 ntTSL 3 BASIC23.14■■□□□ 1.29
BIVM-ERCC5R4GMW8 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC23.14■■□□□ 1.29
BIVM-ERCC5R4GMW8 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC23.14■■□□□ 1.29
BIVM-ERCC5R4GMW8 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC23.14■■□□□ 1.29
BIVM-ERCC5R4GMW8 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC23.14■■□□□ 1.29
BIVM-ERCC5R4GMW8 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC23.14■■□□□ 1.29
BIVM-ERCC5R4GMW8 STK16-202ENST00000409260 1493 ntTSL 5 BASIC23.13■■□□□ 1.29
BIVM-ERCC5R4GMW8 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
BIVM-ERCC5R4GMW8 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC23.13■■□□□ 1.29
BIVM-ERCC5R4GMW8 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
BIVM-ERCC5R4GMW8 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
BIVM-ERCC5R4GMW8 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
BIVM-ERCC5R4GMW8 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
BIVM-ERCC5R4GMW8 OS9-207ENST00000439210 1946 ntTSL 2 BASIC23.13■■□□□ 1.29
BIVM-ERCC5R4GMW8 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
BIVM-ERCC5R4GMW8 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC23.13■■□□□ 1.29
BIVM-ERCC5R4GMW8 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
BIVM-ERCC5R4GMW8 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC23.13■■□□□ 1.29
BIVM-ERCC5R4GMW8 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC23.13■■□□□ 1.29
BIVM-ERCC5R4GMW8 AC093700.1-201ENST00000503348 717 ntBASIC23.13■■□□□ 1.29
BIVM-ERCC5R4GMW8 MIR3940-201ENST00000579148 102 ntBASIC23.13■■□□□ 1.29
BIVM-ERCC5R4GMW8 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
BIVM-ERCC5R4GMW8 AC148477.9-201ENST00000623974 539 ntBASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms