Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC21.04■□□□□ 0.96
CDC42BPBQ9Y5S2 AC016582.2-202ENST00000587765 1094 ntBASIC21.04■□□□□ 0.96
CDC42BPBQ9Y5S2 NEK4P3-201ENST00000604859 544 ntBASIC21.04■□□□□ 0.96
CDC42BPBQ9Y5S2 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC21.04■□□□□ 0.96
CDC42BPBQ9Y5S2 AC110057.1-201ENST00000636031 898 ntBASIC21.04■□□□□ 0.96
CDC42BPBQ9Y5S2 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC21.04■□□□□ 0.96
CDC42BPBQ9Y5S2 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42BPBQ9Y5S2 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42BPBQ9Y5S2 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC21.04■□□□□ 0.96
CDC42BPBQ9Y5S2 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42BPBQ9Y5S2 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42BPBQ9Y5S2 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42BPBQ9Y5S2 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42BPBQ9Y5S2 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CDC42BPBQ9Y5S2 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CDC42BPBQ9Y5S2 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42BPBQ9Y5S2 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
CDC42BPBQ9Y5S2 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC21.04■□□□□ 0.96
CDC42BPBQ9Y5S2 AC010086.2-201ENST00000428616 226 ntBASIC21.04■□□□□ 0.96
CDC42BPBQ9Y5S2 RPL29P2-202ENST00000498671 657 ntBASIC21.04■□□□□ 0.96
CDC42BPBQ9Y5S2 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42BPBQ9Y5S2 PMEL-214ENST00000550447 901 ntTSL 3 BASIC21.04■□□□□ 0.96
CDC42BPBQ9Y5S2 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC21.04■□□□□ 0.96
CDC42BPBQ9Y5S2 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
CDC42BPBQ9Y5S2 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDC42BPBQ9Y5S2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42BPBQ9Y5S2 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42BPBQ9Y5S2 LILRP2-202ENST00000413572 1383 ntBASIC21.03■□□□□ 0.96
CDC42BPBQ9Y5S2 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42BPBQ9Y5S2 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42BPBQ9Y5S2 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42BPBQ9Y5S2 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC21.03■□□□□ 0.96
CDC42BPBQ9Y5S2 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42BPBQ9Y5S2 TUBB4AP1-201ENST00000450755 1325 ntBASIC21.03■□□□□ 0.96
CDC42BPBQ9Y5S2 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42BPBQ9Y5S2 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42BPBQ9Y5S2 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC21.03■□□□□ 0.96
CDC42BPBQ9Y5S2 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42BPBQ9Y5S2 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CDC42BPBQ9Y5S2 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42BPBQ9Y5S2 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42BPBQ9Y5S2 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC21.03■□□□□ 0.96
CDC42BPBQ9Y5S2 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC21.03■□□□□ 0.96
CDC42BPBQ9Y5S2 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC21.03■□□□□ 0.96
CDC42BPBQ9Y5S2 RN7SL578P-201ENST00000477781 283 ntBASIC21.03■□□□□ 0.96
CDC42BPBQ9Y5S2 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC21.03■□□□□ 0.96
CDC42BPBQ9Y5S2 AC004923.3-201ENST00000527532 355 ntBASIC21.03■□□□□ 0.96
CDC42BPBQ9Y5S2 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC21.03■□□□□ 0.96
CDC42BPBQ9Y5S2 CCND3P2-201ENST00000579393 537 ntBASIC21.03■□□□□ 0.96
CDC42BPBQ9Y5S2 RN7SL134P-201ENST00000579756 303 ntBASIC21.03■□□□□ 0.96
CDC42BPBQ9Y5S2 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42BPBQ9Y5S2 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC21.03■□□□□ 0.96
CDC42BPBQ9Y5S2 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42BPBQ9Y5S2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42BPBQ9Y5S2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42BPBQ9Y5S2 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42BPBQ9Y5S2 HYMAI-201ENST00000635591 3347 ntBASIC21.03■□□□□ 0.96
CDC42BPBQ9Y5S2 KRT8P42-201ENST00000405771 1399 ntBASIC21.03■□□□□ 0.96
CDC42BPBQ9Y5S2 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDC42BPBQ9Y5S2 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDC42BPBQ9Y5S2 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC21.02■□□□□ 0.96
CDC42BPBQ9Y5S2 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC21.02■□□□□ 0.96
CDC42BPBQ9Y5S2 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CDC42BPBQ9Y5S2 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDC42BPBQ9Y5S2 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CDC42BPBQ9Y5S2 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC21.02■□□□□ 0.96
CDC42BPBQ9Y5S2 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC21.02■□□□□ 0.96
CDC42BPBQ9Y5S2 CD37-203ENST00000426897 1204 ntTSL 2 BASIC21.02■□□□□ 0.96
CDC42BPBQ9Y5S2 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC21.02■□□□□ 0.96
CDC42BPBQ9Y5S2 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC21.02■□□□□ 0.96
CDC42BPBQ9Y5S2 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC21.02■□□□□ 0.96
CDC42BPBQ9Y5S2 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC21.02■□□□□ 0.96
CDC42BPBQ9Y5S2 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDC42BPBQ9Y5S2 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CDC42BPBQ9Y5S2 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CDC42BPBQ9Y5S2 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDC42BPBQ9Y5S2 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CDC42BPBQ9Y5S2 AL050341.2-201ENST00000567508 1541 ntBASIC21.02■□□□□ 0.96
CDC42BPBQ9Y5S2 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CDC42BPBQ9Y5S2 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CDC42BPBQ9Y5S2 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CDC42BPBQ9Y5S2 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42BPBQ9Y5S2 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC21.01■□□□□ 0.95
CDC42BPBQ9Y5S2 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC21.01■□□□□ 0.95
CDC42BPBQ9Y5S2 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42BPBQ9Y5S2 AC093462.1-201ENST00000621167 1683 ntBASIC21.01■□□□□ 0.95
CDC42BPBQ9Y5S2 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42BPBQ9Y5S2 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42BPBQ9Y5S2 OR7E155P-201ENST00000412208 1014 ntBASIC21.01■□□□□ 0.95
CDC42BPBQ9Y5S2 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC21.01■□□□□ 0.95
CDC42BPBQ9Y5S2 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC21.01■□□□□ 0.95
CDC42BPBQ9Y5S2 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC21.01■□□□□ 0.95
CDC42BPBQ9Y5S2 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC21.01■□□□□ 0.95
CDC42BPBQ9Y5S2 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC21.01■□□□□ 0.95
CDC42BPBQ9Y5S2 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC21.01■□□□□ 0.95
CDC42BPBQ9Y5S2 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42BPBQ9Y5S2 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42BPBQ9Y5S2 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42BPBQ9Y5S2 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDC42BPBQ9Y5S2 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms