Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 AC007191.1-201ENST00000623179 2995 ntBASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 PTPA-217ENST00000434095 870 ntTSL 2 BASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 AC012441.2-201ENST00000444843 739 ntBASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 AC134698.3-201ENST00000523880 214 ntBASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 AC132192.2-201ENST00000596206 1147 ntBASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 AC244394.1-201ENST00000435000 1665 ntBASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 AC026748.1-201ENST00000624349 3251 ntBASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 AC003102.2-201ENST00000589195 1469 ntBASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.42□□□□□ -0.26
NPIPA1Q9UND3 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 AL008718.2-201ENST00000609206 1313 ntBASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 AC091046.1-201ENST00000331871 207 ntBASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 RN7SKP214-201ENST00000364208 315 ntBASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 TLE1P1-201ENST00000422965 589 ntBASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 KLF2P1-201ENST00000447438 1042 ntBASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 AC022447.6-201ENST00000515522 438 ntBASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 AC090857.1-201ENST00000527400 390 ntBASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 AL161670.2-201ENST00000557650 1227 ntBASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 MIR3907-201ENST00000579424 151 ntBASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 RN7SL574P-201ENST00000581512 297 ntBASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 AC009884.2-201ENST00000603110 324 ntBASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 AC008825.2-201ENST00000603374 718 ntBASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 AL353726.2-201ENST00000623259 884 ntBASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 NAP1L6-202ENST00000641404 1222 ntBASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
NPIPA1Q9UND3 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms