Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.78■■□□□ 1.08
RIMBP3Q9UFD9 CA12-203ENST00000422263 2556 ntTSL 2 BASIC21.78■■□□□ 1.08
RIMBP3Q9UFD9 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RIMBP3Q9UFD9 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
RIMBP3Q9UFD9 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RIMBP3Q9UFD9 OR4C6-201ENST00000314259 1020 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
RIMBP3Q9UFD9 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC21.77■■□□□ 1.08
RIMBP3Q9UFD9 RPL21P135-201ENST00000442539 791 ntBASIC21.77■■□□□ 1.08
RIMBP3Q9UFD9 PGAM5-202ENST00000454808 1084 ntTSL 3 BASIC21.77■■□□□ 1.08
RIMBP3Q9UFD9 AC108082.1-201ENST00000510857 331 ntBASIC21.77■■□□□ 1.08
RIMBP3Q9UFD9 MIR2277-201ENST00000515916 93 ntBASIC21.77■■□□□ 1.08
RIMBP3Q9UFD9 OR52P2P-201ENST00000527287 955 ntBASIC21.77■■□□□ 1.08
RIMBP3Q9UFD9 IFI27L1-209ENST00000555523 680 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
RIMBP3Q9UFD9 AC002347.2-201ENST00000584139 171 ntTSL 3 BASIC21.77■■□□□ 1.08
RIMBP3Q9UFD9 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RIMBP3Q9UFD9 CDC20P1-201ENST00000488829 1500 ntBASIC21.77■■□□□ 1.08
RIMBP3Q9UFD9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
RIMBP3Q9UFD9 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RIMBP3Q9UFD9 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
RIMBP3Q9UFD9 FBXO39-201ENST00000321535 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RIMBP3Q9UFD9 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RIMBP3Q9UFD9 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC21.77■■□□□ 1.08
RIMBP3Q9UFD9 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
RIMBP3Q9UFD9 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC21.77■■□□□ 1.08
RIMBP3Q9UFD9 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC21.77■■□□□ 1.07
RIMBP3Q9UFD9 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
RIMBP3Q9UFD9 AC068760.1-201ENST00000493579 1953 ntBASIC21.77■■□□□ 1.07
RIMBP3Q9UFD9 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC21.77■■□□□ 1.07
RIMBP3Q9UFD9 WSB1-203ENST00000427287 1149 ntTSL 2 BASIC21.77■■□□□ 1.07
RIMBP3Q9UFD9 LINC00618-201ENST00000435624 700 ntTSL 5 BASIC21.77■■□□□ 1.07
RIMBP3Q9UFD9 ENTPD1-AS1-210ENST00000452942 864 ntTSL 3 BASIC21.77■■□□□ 1.07
RIMBP3Q9UFD9 TSACC-206ENST00000466306 477 ntTSL 3 BASIC21.77■■□□□ 1.07
RIMBP3Q9UFD9 AC079944.2-201ENST00000478867 734 ntBASIC21.77■■□□□ 1.07
RIMBP3Q9UFD9 MYLK-AS1-203ENST00000485162 587 ntTSL 4 BASIC21.77■■□□□ 1.07
RIMBP3Q9UFD9 HINT1-208ENST00000513012 583 ntTSL 4 BASIC21.77■■□□□ 1.07
RIMBP3Q9UFD9 MIR4539-201ENST00000579784 60 ntBASIC21.77■■□□□ 1.07
RIMBP3Q9UFD9 DSCR9-203ENST00000581640 472 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
RIMBP3Q9UFD9 WSB1-213ENST00000583193 552 ntTSL 4 BASIC21.77■■□□□ 1.07
RIMBP3Q9UFD9 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC21.77■■□□□ 1.07
RIMBP3Q9UFD9 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RIMBP3Q9UFD9 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RIMBP3Q9UFD9 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RIMBP3Q9UFD9 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RIMBP3Q9UFD9 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RIMBP3Q9UFD9 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
RIMBP3Q9UFD9 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC21.76■■□□□ 1.07
RIMBP3Q9UFD9 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RIMBP3Q9UFD9 TUBAP-201ENST00000425085 1352 ntBASIC21.76■■□□□ 1.07
RIMBP3Q9UFD9 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RIMBP3Q9UFD9 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
RIMBP3Q9UFD9 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RIMBP3Q9UFD9 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC21.76■■□□□ 1.07
RIMBP3Q9UFD9 ATF4P4-201ENST00000393544 1930 ntBASIC21.76■■□□□ 1.07
RIMBP3Q9UFD9 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RIMBP3Q9UFD9 ABCA1-201ENST00000374733 923 ntTSL 2 BASIC21.76■■□□□ 1.07
RIMBP3Q9UFD9 AC013269.2-201ENST00000422631 727 ntTSL 2 BASIC21.76■■□□□ 1.07
RIMBP3Q9UFD9 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC21.76■■□□□ 1.07
RIMBP3Q9UFD9 AC140481.2-201ENST00000457169 695 ntTSL 2 BASIC21.76■■□□□ 1.07
RIMBP3Q9UFD9 CMC2-202ENST00000486645 766 ntTSL 3 BASIC21.76■■□□□ 1.07
RIMBP3Q9UFD9 OCIAD1-226ENST00000513391 1288 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
RIMBP3Q9UFD9 AC008915.2-201ENST00000570080 730 ntTSL 5 BASIC21.76■■□□□ 1.07
RIMBP3Q9UFD9 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC21.76■■□□□ 1.07
RIMBP3Q9UFD9 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RIMBP3Q9UFD9 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RIMBP3Q9UFD9 AC005332.8-201ENST00000622750 2735 ntBASIC21.76■■□□□ 1.07
RIMBP3Q9UFD9 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RIMBP3Q9UFD9 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RIMBP3Q9UFD9 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
RIMBP3Q9UFD9 BARD1-214ENST00000620057 1456 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RIMBP3Q9UFD9 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RIMBP3Q9UFD9 CSF2RA-201ENST00000355432 1628 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RIMBP3Q9UFD9 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC21.75■■□□□ 1.07
RIMBP3Q9UFD9 TRAIP-202ENST00000469027 1145 ntTSL 5 BASIC21.75■■□□□ 1.07
RIMBP3Q9UFD9 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RIMBP3Q9UFD9 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RIMBP3Q9UFD9 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC21.75■■□□□ 1.07
RIMBP3Q9UFD9 AC034205.3-201ENST00000603595 1376 ntBASIC21.75■■□□□ 1.07
RIMBP3Q9UFD9 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RIMBP3Q9UFD9 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RIMBP3Q9UFD9 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RIMBP3Q9UFD9 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RIMBP3Q9UFD9 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RIMBP3Q9UFD9 PSAT1-201ENST00000347159 1411 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RIMBP3Q9UFD9 CDA-201ENST00000375071 963 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RIMBP3Q9UFD9 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RIMBP3Q9UFD9 RNASE11-201ENST00000398008 872 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
RIMBP3Q9UFD9 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC21.74■■□□□ 1.07
RIMBP3Q9UFD9 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC21.74■■□□□ 1.07
RIMBP3Q9UFD9 AL358115.1-202ENST00000455257 675 ntTSL 3 BASIC21.74■■□□□ 1.07
RIMBP3Q9UFD9 EEF1GP2-201ENST00000509352 1243 ntBASIC21.74■■□□□ 1.07
RIMBP3Q9UFD9 RN7SL162P-201ENST00000579233 292 ntBASIC21.74■■□□□ 1.07
RIMBP3Q9UFD9 AL136115.2-201ENST00000602889 587 ntTSL 5 BASIC21.74■■□□□ 1.07
RIMBP3Q9UFD9 FXYD3-207ENST00000604255 780 ntTSL 5 BASIC21.74■■□□□ 1.07
RIMBP3Q9UFD9 AC010601.2-201ENST00000623060 774 ntBASIC21.74■■□□□ 1.07
RIMBP3Q9UFD9 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
RIMBP3Q9UFD9 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
RIMBP3Q9UFD9 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RIMBP3Q9UFD9 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RIMBP3Q9UFD9 USP39-220ENST00000613444 2161 ntTSL 2 BASIC21.74■■□□□ 1.07
RIMBP3Q9UFD9 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms