Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.62□□□□□ -0.23
CNIH4Q9P003 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.62□□□□□ -0.23
CNIH4Q9P003 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.62□□□□□ -0.23
CNIH4Q9P003 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CNIH4Q9P003 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
CNIH4Q9P003 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.62□□□□□ -0.23
CNIH4Q9P003 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CNIH4Q9P003 MIR4538-201ENST00000581377 78 ntBASIC13.62□□□□□ -0.23
CNIH4Q9P003 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.62□□□□□ -0.23
CNIH4Q9P003 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CNIH4Q9P003 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.62□□□□□ -0.23
CNIH4Q9P003 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CNIH4Q9P003 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CNIH4Q9P003 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CNIH4Q9P003 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CNIH4Q9P003 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
CNIH4Q9P003 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CNIH4Q9P003 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CNIH4Q9P003 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CNIH4Q9P003 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CNIH4Q9P003 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.62□□□□□ -0.23
CNIH4Q9P003 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CNIH4Q9P003 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CNIH4Q9P003 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CNIH4Q9P003 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.62□□□□□ -0.23
CNIH4Q9P003 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CNIH4Q9P003 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CNIH4Q9P003 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CNIH4Q9P003 AC126335.2-201ENST00000623362 4637 ntBASIC13.62□□□□□ -0.23
CNIH4Q9P003 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CNIH4Q9P003 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CNIH4Q9P003 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CNIH4Q9P003 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CNIH4Q9P003 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CNIH4Q9P003 SHC1P1-201ENST00000425230 1745 ntBASIC13.61□□□□□ -0.23
CNIH4Q9P003 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNIH4Q9P003 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.61□□□□□ -0.23
CNIH4Q9P003 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CNIH4Q9P003 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
CNIH4Q9P003 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNIH4Q9P003 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.61□□□□□ -0.23
CNIH4Q9P003 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNIH4Q9P003 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CNIH4Q9P003 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.61□□□□□ -0.23
CNIH4Q9P003 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CNIH4Q9P003 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CNIH4Q9P003 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CNIH4Q9P003 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CNIH4Q9P003 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.61□□□□□ -0.23
CNIH4Q9P003 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.61□□□□□ -0.23
CNIH4Q9P003 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNIH4Q9P003 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNIH4Q9P003 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNIH4Q9P003 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CNIH4Q9P003 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.61□□□□□ -0.23
CNIH4Q9P003 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.61□□□□□ -0.23
CNIH4Q9P003 AL354877.1-201ENST00000424412 413 ntBASIC13.61□□□□□ -0.23
CNIH4Q9P003 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.61□□□□□ -0.23
CNIH4Q9P003 FAM58BP-201ENST00000439056 645 ntBASIC13.61□□□□□ -0.23
CNIH4Q9P003 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.61□□□□□ -0.23
CNIH4Q9P003 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNIH4Q9P003 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.61□□□□□ -0.23
CNIH4Q9P003 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.61□□□□□ -0.23
CNIH4Q9P003 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
CNIH4Q9P003 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.61□□□□□ -0.23
CNIH4Q9P003 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.61□□□□□ -0.23
CNIH4Q9P003 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.61□□□□□ -0.23
CNIH4Q9P003 AL022328.3-201ENST00000607943 679 ntBASIC13.61□□□□□ -0.23
CNIH4Q9P003 AL096828.3-201ENST00000615354 462 ntBASIC13.61□□□□□ -0.23
CNIH4Q9P003 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CNIH4Q9P003 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.61□□□□□ -0.23
CNIH4Q9P003 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNIH4Q9P003 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNIH4Q9P003 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNIH4Q9P003 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNIH4Q9P003 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNIH4Q9P003 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CNIH4Q9P003 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.61□□□□□ -0.23
CNIH4Q9P003 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNIH4Q9P003 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CNIH4Q9P003 AL359881.3-201ENST00000602640 1721 ntBASIC13.61□□□□□ -0.23
CNIH4Q9P003 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNIH4Q9P003 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
CNIH4Q9P003 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNIH4Q9P003 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CNIH4Q9P003 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
CNIH4Q9P003 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CNIH4Q9P003 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNIH4Q9P003 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNIH4Q9P003 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.6□□□□□ -0.23
CNIH4Q9P003 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.6□□□□□ -0.23
CNIH4Q9P003 AC009093.2-202ENST00000620513 2079 ntBASIC13.6□□□□□ -0.23
CNIH4Q9P003 AC089987.1-201ENST00000551654 2209 ntBASIC13.6□□□□□ -0.23
CNIH4Q9P003 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNIH4Q9P003 CICP16-201ENST00000502609 2813 ntBASIC13.6□□□□□ -0.23
CNIH4Q9P003 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CNIH4Q9P003 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNIH4Q9P003 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNIH4Q9P003 AC090505.1-201ENST00000430515 1834 ntBASIC13.6□□□□□ -0.23
CNIH4Q9P003 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms