Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 AMT-256ENST00000638063 1783 ntTSL 5 BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 RPSAP31-201ENST00000416648 895 ntBASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 RN7SL81P-201ENST00000493781 261 ntBASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 AC073352.2-201ENST00000609385 439 ntBASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 RN7SL736P-201ENST00000613111 269 ntBASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 MIR7845-201ENST00000618396 99 ntBASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 RETN-203ENST00000629642 400 ntTSL 5 BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KIAA1549Q9HCM3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 HLA-DQB1-202ENST00000399079 1501 ntBASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 AC074138.1-201ENST00000611182 1303 ntBASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 HMGA1P1-201ENST00000415560 1062 ntBASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 AC098935.1-201ENST00000446057 611 ntBASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 PARP8-206ENST00000503665 572 ntTSL 4 BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 KLF17P1-201ENST00000547105 1126 ntBASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 AC135983.4-201ENST00000564116 1262 ntBASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 AC087045.2-201ENST00000606279 1003 ntBASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 AC092171.5-201ENST00000608012 942 ntBASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 MIR6842-201ENST00000612539 65 ntBASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 LINC01783-202ENST00000614408 828 ntBASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 BX284668.2-205ENST00000619677 828 ntBASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 AC068760.1-201ENST00000493579 1953 ntBASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 AC138969.2-201ENST00000532739 9932 ntBASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
KIAA1549Q9HCM3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
KIAA1549Q9HCM3 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.74□□□□□ -0.37
KIAA1549Q9HCM3 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC12.74□□□□□ -0.37
KIAA1549Q9HCM3 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC12.74□□□□□ -0.37
KIAA1549Q9HCM3 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
KIAA1549Q9HCM3 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
KIAA1549Q9HCM3 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
KIAA1549Q9HCM3 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC12.74□□□□□ -0.37
KIAA1549Q9HCM3 AC006987.1-201ENST00000413610 527 ntBASIC12.74□□□□□ -0.37
KIAA1549Q9HCM3 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC12.74□□□□□ -0.37
KIAA1549Q9HCM3 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC12.74□□□□□ -0.37
KIAA1549Q9HCM3 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
KIAA1549Q9HCM3 ORAOV1P1-201ENST00000503108 395 ntBASIC12.74□□□□□ -0.37
KIAA1549Q9HCM3 AC114947.1-202ENST00000514136 344 ntBASIC12.74□□□□□ -0.37
KIAA1549Q9HCM3 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms