Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.94□□□□□ -0.34
VRK1Q99986 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
VRK1Q99986 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.94□□□□□ -0.34
VRK1Q99986 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
VRK1Q99986 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VRK1Q99986 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VRK1Q99986 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VRK1Q99986 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.94□□□□□ -0.34
VRK1Q99986 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
VRK1Q99986 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
VRK1Q99986 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
VRK1Q99986 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VRK1Q99986 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VRK1Q99986 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VRK1Q99986 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VRK1Q99986 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VRK1Q99986 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.93□□□□□ -0.34
VRK1Q99986 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VRK1Q99986 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
VRK1Q99986 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VRK1Q99986 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.93□□□□□ -0.34
VRK1Q99986 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.93□□□□□ -0.34
VRK1Q99986 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VRK1Q99986 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VRK1Q99986 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.93□□□□□ -0.34
VRK1Q99986 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.93□□□□□ -0.34
VRK1Q99986 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.93□□□□□ -0.34
VRK1Q99986 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VRK1Q99986 ACE3P-201ENST00000423435 1973 ntBASIC12.93□□□□□ -0.34
VRK1Q99986 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VRK1Q99986 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
VRK1Q99986 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VRK1Q99986 MIR326-201ENST00000362220 95 ntBASIC12.93□□□□□ -0.34
VRK1Q99986 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
VRK1Q99986 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC12.93□□□□□ -0.34
VRK1Q99986 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.93□□□□□ -0.34
VRK1Q99986 Z93015.1-201ENST00000451718 390 ntBASIC12.93□□□□□ -0.34
VRK1Q99986 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.93□□□□□ -0.34
VRK1Q99986 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VRK1Q99986 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
VRK1Q99986 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
VRK1Q99986 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
VRK1Q99986 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC12.93□□□□□ -0.34
VRK1Q99986 AC243960.2-201ENST00000600996 747 ntBASIC12.93□□□□□ -0.34
VRK1Q99986 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC12.93□□□□□ -0.34
VRK1Q99986 MIR6869-201ENST00000619434 62 ntBASIC12.93□□□□□ -0.34
VRK1Q99986 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VRK1Q99986 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VRK1Q99986 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
VRK1Q99986 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
VRK1Q99986 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VRK1Q99986 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
VRK1Q99986 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VRK1Q99986 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.93□□□□□ -0.34
VRK1Q99986 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VRK1Q99986 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
VRK1Q99986 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.93□□□□□ -0.34
VRK1Q99986 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.93□□□□□ -0.34
VRK1Q99986 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VRK1Q99986 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VRK1Q99986 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VRK1Q99986 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.93□□□□□ -0.34
VRK1Q99986 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.93□□□□□ -0.34
VRK1Q99986 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
VRK1Q99986 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.92□□□□□ -0.34
VRK1Q99986 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.92□□□□□ -0.34
VRK1Q99986 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC12.92□□□□□ -0.34
VRK1Q99986 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.92□□□□□ -0.34
VRK1Q99986 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
VRK1Q99986 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
VRK1Q99986 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.92□□□□□ -0.34
VRK1Q99986 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 AC055811.4-201ENST00000624039 1754 ntBASIC12.92□□□□□ -0.34
VRK1Q99986 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.92□□□□□ -0.34
VRK1Q99986 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.92□□□□□ -0.34
VRK1Q99986 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.92□□□□□ -0.34
VRK1Q99986 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.92□□□□□ -0.34
VRK1Q99986 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.92□□□□□ -0.34
VRK1Q99986 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VRK1Q99986 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms