Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SNX18Q96RF0 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNX18Q96RF0 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.31□□□□□ -0.28
SNX18Q96RF0 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNX18Q96RF0 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNX18Q96RF0 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC13.31□□□□□ -0.28
SNX18Q96RF0 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNX18Q96RF0 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNX18Q96RF0 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNX18Q96RF0 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNX18Q96RF0 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.31□□□□□ -0.28
SNX18Q96RF0 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
SNX18Q96RF0 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNX18Q96RF0 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC13.31□□□□□ -0.28
SNX18Q96RF0 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
SNX18Q96RF0 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNX18Q96RF0 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNX18Q96RF0 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNX18Q96RF0 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNX18Q96RF0 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SNX18Q96RF0 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNX18Q96RF0 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNX18Q96RF0 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
SNX18Q96RF0 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
SNX18Q96RF0 AC098850.1-201ENST00000419919 790 ntBASIC13.31□□□□□ -0.28
SNX18Q96RF0 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNX18Q96RF0 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNX18Q96RF0 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.31□□□□□ -0.28
SNX18Q96RF0 RN7SL837P-201ENST00000463010 287 ntBASIC13.31□□□□□ -0.28
SNX18Q96RF0 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.31□□□□□ -0.28
SNX18Q96RF0 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.31□□□□□ -0.28
SNX18Q96RF0 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.31□□□□□ -0.28
SNX18Q96RF0 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SNX18Q96RF0 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.31□□□□□ -0.28
SNX18Q96RF0 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.31□□□□□ -0.28
SNX18Q96RF0 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.31□□□□□ -0.28
SNX18Q96RF0 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SNX18Q96RF0 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
SNX18Q96RF0 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SNX18Q96RF0 KRT8P24-201ENST00000560290 1559 ntBASIC13.31□□□□□ -0.28
SNX18Q96RF0 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SNX18Q96RF0 KRT8P35-201ENST00000483942 1338 ntBASIC13.31□□□□□ -0.28
SNX18Q96RF0 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNX18Q96RF0 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SNX18Q96RF0 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SNX18Q96RF0 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNX18Q96RF0 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.31□□□□□ -0.28
SNX18Q96RF0 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNX18Q96RF0 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.31□□□□□ -0.28
SNX18Q96RF0 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SNX18Q96RF0 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SNX18Q96RF0 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SNX18Q96RF0 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SNX18Q96RF0 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
SNX18Q96RF0 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
SNX18Q96RF0 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNX18Q96RF0 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.3□□□□□ -0.28
SNX18Q96RF0 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNX18Q96RF0 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.3□□□□□ -0.28
SNX18Q96RF0 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNX18Q96RF0 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SNX18Q96RF0 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SNX18Q96RF0 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SNX18Q96RF0 MYADML-201ENST00000474610 2147 ntBASIC13.3□□□□□ -0.28
SNX18Q96RF0 AC011840.2-201ENST00000563063 1520 ntBASIC13.3□□□□□ -0.28
SNX18Q96RF0 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SNX18Q96RF0 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.3□□□□□ -0.28
SNX18Q96RF0 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SNX18Q96RF0 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNX18Q96RF0 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.3□□□□□ -0.28
SNX18Q96RF0 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNX18Q96RF0 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNX18Q96RF0 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SNX18Q96RF0 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SNX18Q96RF0 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
SNX18Q96RF0 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SNX18Q96RF0 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.3□□□□□ -0.28
SNX18Q96RF0 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNX18Q96RF0 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SNX18Q96RF0 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.3□□□□□ -0.28
SNX18Q96RF0 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SNX18Q96RF0 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNX18Q96RF0 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SNX18Q96RF0 AC009486.1-201ENST00000569860 813 ntBASIC13.3□□□□□ -0.28
SNX18Q96RF0 CLUHP6-201ENST00000580789 941 ntBASIC13.3□□□□□ -0.28
SNX18Q96RF0 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNX18Q96RF0 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.3□□□□□ -0.28
SNX18Q96RF0 AC017083.2-201ENST00000608069 979 ntBASIC13.3□□□□□ -0.28
SNX18Q96RF0 MIR6752-201ENST00000618442 71 ntBASIC13.3□□□□□ -0.28
SNX18Q96RF0 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SNX18Q96RF0 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SNX18Q96RF0 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SNX18Q96RF0 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SNX18Q96RF0 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNX18Q96RF0 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
SNX18Q96RF0 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNX18Q96RF0 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.3□□□□□ -0.28
SNX18Q96RF0 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SNX18Q96RF0 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
SNX18Q96RF0 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms