Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CFAP53Q96M91 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CFAP53Q96M91 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC19.3■□□□□ 0.68
CFAP53Q96M91 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CFAP53Q96M91 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CFAP53Q96M91 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CFAP53Q96M91 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC19.3■□□□□ 0.68
CFAP53Q96M91 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC19.3■□□□□ 0.68
CFAP53Q96M91 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC19.3■□□□□ 0.68
CFAP53Q96M91 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC19.3■□□□□ 0.68
CFAP53Q96M91 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CFAP53Q96M91 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC19.3■□□□□ 0.68
CFAP53Q96M91 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CFAP53Q96M91 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC19.3■□□□□ 0.68
CFAP53Q96M91 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CFAP53Q96M91 AL353637.1-201ENST00000451571 732 ntBASIC19.3■□□□□ 0.68
CFAP53Q96M91 PFN2-206ENST00000461930 606 ntTSL 4 BASIC19.3■□□□□ 0.68
CFAP53Q96M91 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC19.3■□□□□ 0.68
CFAP53Q96M91 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC19.3■□□□□ 0.68
CFAP53Q96M91 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC19.3■□□□□ 0.68
CFAP53Q96M91 IRF3-215ENST00000596822 823 ntTSL 3 BASIC19.3■□□□□ 0.68
CFAP53Q96M91 AL022334.2-201ENST00000610000 484 ntBASIC19.3■□□□□ 0.68
CFAP53Q96M91 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CFAP53Q96M91 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC19.3■□□□□ 0.68
CFAP53Q96M91 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CFAP53Q96M91 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CFAP53Q96M91 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CFAP53Q96M91 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC19.3■□□□□ 0.68
CFAP53Q96M91 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CFAP53Q96M91 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CFAP53Q96M91 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC19.3■□□□□ 0.68
CFAP53Q96M91 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC19.3■□□□□ 0.68
CFAP53Q96M91 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CFAP53Q96M91 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CFAP53Q96M91 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CFAP53Q96M91 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CFAP53Q96M91 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CFAP53Q96M91 USP28-214ENST00000545540 3431 ntTSL 2 BASIC19.29■□□□□ 0.68
CFAP53Q96M91 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CFAP53Q96M91 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CFAP53Q96M91 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC19.29■□□□□ 0.68
CFAP53Q96M91 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CFAP53Q96M91 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CFAP53Q96M91 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CFAP53Q96M91 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CFAP53Q96M91 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CFAP53Q96M91 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CFAP53Q96M91 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CFAP53Q96M91 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CFAP53Q96M91 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC19.29■□□□□ 0.68
CFAP53Q96M91 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CFAP53Q96M91 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC19.29■□□□□ 0.68
CFAP53Q96M91 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CFAP53Q96M91 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC19.29■□□□□ 0.68
CFAP53Q96M91 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC19.29■□□□□ 0.68
CFAP53Q96M91 AC073150.1-201ENST00000450406 1084 ntBASIC19.29■□□□□ 0.68
CFAP53Q96M91 RN7SL277P-201ENST00000481521 288 ntBASIC19.29■□□□□ 0.68
CFAP53Q96M91 TPI1-206ENST00000488464 791 ntTSL 5 BASIC19.29■□□□□ 0.68
CFAP53Q96M91 NUP210P1-202ENST00000504322 710 ntBASIC19.29■□□□□ 0.68
CFAP53Q96M91 AC245884.6-201ENST00000515672 1067 ntBASIC19.29■□□□□ 0.68
CFAP53Q96M91 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC19.29■□□□□ 0.68
CFAP53Q96M91 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC19.29■□□□□ 0.68
CFAP53Q96M91 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC19.29■□□□□ 0.68
CFAP53Q96M91 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC19.29■□□□□ 0.68
CFAP53Q96M91 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC19.29■□□□□ 0.68
CFAP53Q96M91 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CFAP53Q96M91 AC091812.3-201ENST00000621362 345 ntBASIC19.29■□□□□ 0.68
CFAP53Q96M91 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CFAP53Q96M91 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CFAP53Q96M91 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CFAP53Q96M91 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC19.29■□□□□ 0.68
CFAP53Q96M91 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CFAP53Q96M91 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC19.29■□□□□ 0.68
CFAP53Q96M91 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CFAP53Q96M91 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CFAP53Q96M91 RDX-218ENST00000544551 4117 ntTSL 2 BASIC19.28■□□□□ 0.68
CFAP53Q96M91 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CFAP53Q96M91 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC19.28■□□□□ 0.68
CFAP53Q96M91 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CFAP53Q96M91 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CFAP53Q96M91 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CFAP53Q96M91 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CFAP53Q96M91 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CFAP53Q96M91 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CFAP53Q96M91 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CFAP53Q96M91 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CFAP53Q96M91 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CFAP53Q96M91 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CFAP53Q96M91 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CFAP53Q96M91 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC19.28■□□□□ 0.68
CFAP53Q96M91 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CFAP53Q96M91 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CFAP53Q96M91 AC093752.3-201ENST00000567343 901 ntBASIC19.28■□□□□ 0.68
CFAP53Q96M91 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC19.28■□□□□ 0.68
CFAP53Q96M91 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC19.28■□□□□ 0.68
CFAP53Q96M91 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC19.28■□□□□ 0.68
CFAP53Q96M91 AL021578.1-201ENST00000613646 709 ntBASIC19.28■□□□□ 0.68
CFAP53Q96M91 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC19.28■□□□□ 0.68
CFAP53Q96M91 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC19.28■□□□□ 0.68
CFAP53Q96M91 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms